Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Autolysis response regulater LytR from Pseudomonas fluorescens FW300-N2E2

 Score =  113 bits (283), Expect = 3e-30
 Identities = 77/230 (33%), Positives = 124/230 (53%), Gaps = 25/230 (10%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPL R  L++++ EL     +  SA NG+ AL  I+ H+PD+V LDIRMP +DG+
Sbjct: 4   LIVDDEPLARERLSRMVGELEGYSVLEPSATNGEEALALIDSHKPDIVLLDIRMPGLDGL 63

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
           +VA +L ++   P VVF T  D++     +  A+ YL+KP+++       E L + LR+ 
Sbjct: 64  QVAAKLCERESPPAVVFCTTRDDFPPEVLQAGAVGYLVKPVAT-------EALLEALRKA 116

Query: 129 VAPSNDLAQLMSQFEQLTRTVK-----PQYQVWLKASKGEEIHLIAVNELLYVKAEDKYL 183
             P+        Q   LTR        P+  +  +  KG  I LI +N+++Y  A+ KY+
Sbjct: 117 ERPNR------VQLAALTRPAAESGSGPRSHISARTRKG--IELIPLNQVVYFIADHKYV 168

Query: 184 SLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTR 233
           +L    G    E LL   LK L  +    +F +IHR+ +V   +I+++ R
Sbjct: 169 TLRHESG----EVLLDEPLKALEDEFG-ERFVRIHRNALVARERIERLQR 213