Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Response regulator of the LytR/AlgR family from Pseudomonas stutzeri RCH2

 Score =  120 bits (301), Expect = 3e-32
 Identities = 82/247 (33%), Positives = 134/247 (54%), Gaps = 18/247 (7%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPL R  L++L+ +L     +  +A NG+ AL  IE+ +PDVV LDIRMP +DG+
Sbjct: 4   LIVDDEPLARERLSRLVGDLDGYRVLEPAASNGEEALTLIEELRPDVVLLDIRMPGLDGL 63

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
           +VA +L +    P V+F TA+DE+A+ AF+  A+ YL+KP+    L    +K ++  R  
Sbjct: 64  QVAAKLCETDAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRPEHLTEALKKAERPNRVQ 123

Query: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188
           +A     A +            P+  +  +  KG  I LI ++ ++Y  A+ KY++L  +
Sbjct: 124 LAALTRPAAVSG--------AGPRSHISARTRKG--IELIPLDHVIYFIADHKYVTLRHI 173

Query: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRLQ- 247
            G    E LL   LK L  +    +F +IHR+ +V   +I+++ R   G   + +  L+ 
Sbjct: 174 GG----EVLLDEPLKSLEDEFG-ERFVRIHRNALVFRDRIERLQRTPLGHFQLFLKGLEG 228

Query: 248 --LPVSR 252
             L VSR
Sbjct: 229 EALTVSR 235