Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Two-component response regulator AlgR from Pseudomonas syringae pv. syringae B728a

 Score =  125 bits (313), Expect = 1e-33
 Identities = 82/230 (35%), Positives = 127/230 (55%), Gaps = 25/230 (10%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPL R  L++++ E+     +  SA NG+ AL  IE H+PDVV LDIRMP +DG+
Sbjct: 4   LIVDDEPLARERLSRMVNEIEGYRVLEPSASNGEEALALIEAHKPDVVLLDIRMPGLDGL 63

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
           +VA RL ++   P VVF TA+DE+A+ AF+  A+ YL+KP+ S  L     K ++  R  
Sbjct: 64  QVAARLCEREAPPAVVFCTAHDEFALEAFQVSAVGYLVKPVRSEHLVEALRKAERPNR-- 121

Query: 129 VAPSNDLAQLMSQFEQLTRTVK-----PQYQVWLKASKGEEIHLIAVNELLYVKAEDKYL 183
                       Q   LTR        P+  +  +  KG  I LI +++++Y  A+ KY+
Sbjct: 122 -----------VQLAALTRPAAESGSGPRSHISARTRKG--IELIPLDQVIYFIADHKYV 168

Query: 184 SLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTR 233
           +L    G    E LL   LK L  +   ++F +IHR+ +V   +I+++ R
Sbjct: 169 TLRHEGG----EVLLDEPLKALEDEFG-DRFVRIHRNALVARERIERLQR 213