Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., putative two-component response-regulatory protein YehT (RefSeq) from Shewanella amazonensis SB2B

 Score =  119 bits (298), Expect = 6e-32
 Identities = 79/246 (32%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 7   TAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMD 66
           + +L DDEP  R  L +LL    P + IVA A N   A+QAI QH+P ++FLDI+MP++ 
Sbjct: 3   SCILVDDEPFAREALAELLVR-HPDVNIVAQASNAIEAIQAINQHKPALLFLDIQMPRIS 61

Query: 67  GIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLR 126
           G+E+   +L +  +P VVF+TA+DEYA+ AFE HA DYLLKP+  +RLA+  +++++  R
Sbjct: 62  GMELLA-MLDKDTMPRVVFVTAFDEYAIKAFELHAFDYLLKPIDDARLANTMDRVRKDQR 120

Query: 127 RNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLY 186
                            Q   ++ P+    L    G  + ++ + E+ YV     +  + 
Sbjct: 121 ----------------PQDVTSLAPERLAHLPCFSGNRLKVVPIEEVEYV-----FSDVG 159

Query: 187 KVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRL 246
            +H +T +  +      +LL +  P  F   HR  ++    I ++    GG   V     
Sbjct: 160 GIHVSTANGRVHTQMTLKLLEEKTPLIF--CHRQYLIAPAAIAEIVLLDGGAEVVTRSGA 217

Query: 247 QLPVSR 252
           ++PVSR
Sbjct: 218 RVPVSR 223