Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., two component transcriptional regulator, LytTR family from Marinobacter adhaerens HP15

 Score =  187 bits (475), Expect = 2e-52
 Identities = 105/253 (41%), Positives = 155/253 (61%), Gaps = 10/253 (3%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMDGI 68
           ++ DDEPLLR HL KLL +LW   E V    +G  A++ I +     VFLDI+MP M G+
Sbjct: 4   MVVDDEPLLRFHLQKLLTDLWDEAEQVICVGSGVEAVERINEVDVHTVFLDIKMPGMSGV 63

Query: 69  EVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLRRN 128
           E A  L        +VF+TAYD++A+ AFE  A+DYLLKP+   RL  C E+L+++  R 
Sbjct: 64  ETAGVLRDMGFSGNLVFVTAYDQHALEAFEHEAVDYLLKPVHGDRLYQCIERLRKRDERT 123

Query: 129 VAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLYKV 188
           V    D AQL    ++L          W+ A++G+++H+I ++++    AEDKY ++   
Sbjct: 124 VKYELDAAQL----KRLMPVAGSSELRWINATRGQQVHVIRLDDVCCFIAEDKYTTVVTE 179

Query: 189 HGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKMWVHIDRL-- 246
           +G    E+L+R ++KEL   LD +QFW+IHR+I+V VG+I +V RD  G   V +D +  
Sbjct: 180 NG----EFLIRKTIKELTETLDVDQFWRIHRAIIVQVGRISRVERDEEGHYEVFMDGIGR 235

Query: 247 QLPVSRALQHLFK 259
           +LPVSR+  HLFK
Sbjct: 236 RLPVSRSNAHLFK 248