Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 78.2 bits (191), Expect = 2e-19
 Identities = 64/244 (26%), Positives = 122/244 (50%), Gaps = 20/244 (8%)

Query: 9   VLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQH-QPDVVFLDIRMPKMDG 67
           V+ +DE     +L  LL E+ P  EI+A  ++    ++    H  P++VF+DI +     
Sbjct: 4   VIIEDEKAAVRNLTSLLNEVKPEAEIIAILDSINSTIEWFGIHPMPELVFMDIHLADGSA 63

Query: 68  IEVARRL-LQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLR 126
            E+   + +  P    ++F TAYDEYA+ AF+ ++IDYLLKP+    +    EKL     
Sbjct: 64  FEIFDHISITCP----IIFTTAYDEYALRAFKVNSIDYLLKPIGKEDIEHAFEKLDN--L 117

Query: 127 RNVAPSNDLAQLMSQFE--QLTRTVKPQYQV---WLKASKGEEIHLIAVN--ELLYVKAE 179
           ++  P N   +   + E   L  ++K Q      +L   KG+++  ++++  +L Y+K  
Sbjct: 118 QDAIPENGSKRENKEEELLHLIHSLKKQENYKTHFLIPMKGDKLLPVSIDMIQLFYIK-- 175

Query: 180 DKYLSLYKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKIDKVTRDFGGKM 239
           D  +      G    EY    +L EL+  L+P+ F++++R  +++   I  +   F  ++
Sbjct: 176 DCQVKAVLTDGM---EYNFSLTLDELVDCLNPSLFFRVNRQFLISREAIKDIDLWFNSRL 232

Query: 240 WVHI 243
            +++
Sbjct: 233 SINL 236