Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  105 bits (263), Expect = 7e-28
 Identities = 76/241 (31%), Positives = 107/241 (44%), Gaps = 46/241 (19%)

Query: 2   MNQTYTAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIR 61
           M      ++ DDEPL R  + KLL E    L++V S  +   A   +EQH  D+VFLDI+
Sbjct: 1   MYNVMNCIIVDDEPLAREAM-KLLIEEAECLQLVGSFNSAATASDFMEQHVVDLVFLDIQ 59

Query: 62  MPKMDGIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKL 121
           MP + GIE AR +    K  LV+F TAY EYA+ ++E  AIDYL+KP+ + R     EK 
Sbjct: 60  MPGITGIEFARTI---SKRTLVIFTTAYTEYALDSYEVDAIDYLIKPVEAERFQKAVEKA 116

Query: 122 QQQLRRNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDK 181
           Q                              Y   L   + E I  I   E  +VKAE +
Sbjct: 117 Q-----------------------------SYHSLLLQEEKEAIETIVAAEYFFVKAERR 147

Query: 182 YLSL-------------YKVHGATTHEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKI 228
           Y  +             Y +        + R SLK +   L  + F ++++S +VN   I
Sbjct: 148 YFKVNFSDILFVEGLKDYVILQLGEQRIITRMSLKAVFDLLPKDSFLRVNKSYIVNTAHI 207

Query: 229 D 229
           D
Sbjct: 208 D 208