Pairwise Alignments

Query, 261 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., putative two-component response-regulatory protein YehT (RefSeq) from Shewanella sp. ANA-3

 Score = 97.1 bits (240), Expect = 3e-25
 Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 35/259 (13%)

Query: 7   TAVLADDEPLLRHHLNKLLAELWPALEIVASAENGQIALQAIEQHQPDVVFLDIRMPKMD 66
           T ++ DDE   R  L  LL +    +EI+    N   ALQ I + +P ++FLDI+MP++ 
Sbjct: 3   TCLIVDDELFAREELADLLGQE-ADIEIIGQCSNAIEALQTIAKEKPQLIFLDIQMPRIS 61

Query: 67  GIEVARRLLQQPKVPLVVFITAYDEYAVSAFETHAIDYLLKPLSSSRLASCCEKLQQQLR 126
           G+E+   +L    +P +VF+TA+DE+AV AF+ HA DYLLKP+ + RL+   ++    +R
Sbjct: 62  GMELIA-MLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDAERLSQTLKR----VR 116

Query: 127 RNVAPSNDLAQLMSQFEQLTRTVKPQYQVWLKASKGEEIHLIAVNELLYVKAEDKYLSLY 186
           +++ P            Q    + P     L    G ++ +I + ++ YV     +  L 
Sbjct: 117 KDLTP------------QAVNLIAPSTLEHLPCYSGSKLKVIPIQDVEYV-----FSDLS 159

Query: 187 KVHGATT----HEYLLRSSLKELLAQLDPNQFWQIHRSIVVNVGKID---KVTRDFGGKM 239
            +H A T    H  L    L+E    +  ++ + I    +  +  +D   +VT   G K 
Sbjct: 160 GIHVACTKGKVHTQLTLKVLEEKTPLVRCHRQYLISPKAIAEIELLDTGAEVTTLLGDK- 218

Query: 240 WVHIDRLQLPVSRALQHLF 258
            V + R  L   ++L+ LF
Sbjct: 219 -VPVSRRYL---KSLKQLF 233