Pairwise Alignments

Query, 3263 a.a., type I secretion C-terminal target domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 51.6 bits (122), Expect = 3e-10
 Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 15/143 (10%)

Query: 3047 SPDALESLKVVGLDEG---VHTLSLTALSTESDGSSAPSANSIDYRIE--IAADGSLLDH 3101
            S D+LE ++     +    + T+         D SS P+A  +    +  + + GS    
Sbjct: 133  SLDSLEEIEAYDFSKNPIALPTVQALLAQVTGDDSSLPNALQVTAIAQQVVVSSGSPATA 192

Query: 3102 RSATDDSLLVAGNS--------GMTLLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGAD 3153
             + ++   +V GN           TL+  +G+D +  G GDD L+G LGAD L GG G D
Sbjct: 193  IAISEARSIVKGNDDNQLSSSEAFTLIGTNGNDLLTAGNGDDNLIGELGADTLTGGAGQD 252

Query: 3154 MFKW--TLDGVDDKVDHIRDFNV 3174
             F +    D      D I DF +
Sbjct: 253  QFLYRAIADSQLSGFDQITDFQI 275