Pairwise Alignments

Query, 3263 a.a., type I secretion C-terminal target domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., hemolysin-type calcium-binding protein from Sinorhizobium meliloti 1021

 Score = 59.3 bits (142), Expect = 2e-12
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 3103 SATDDSLLVAGNSGMTLLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGADMFKWTLDGV 3162
            S  D    +AG+    L    G+D + GGAG+DVL GG G D++ GG GAD F W+ D  
Sbjct: 413  SGNDSIRTLAGDD--QLAGNDGNDRLDGGAGNDVLWGGAGDDVMTGGAGADTFLWSSDTF 470

Query: 3163 D-DKVDHIRDFNVNEGD 3178
                VD I DF+ + GD
Sbjct: 471  SFAGVDRITDFDADGGD 487



 Score = 52.4 bits (124), Expect = 3e-10
 Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 7/162 (4%)

Query: 3029 LSSTAGSVTDLGNGRWEVSPDALESLKVVGLDEGVHTLSLTALSTESDGSSAPSANSIDY 3088
            +++ + +V D GNG  ++S         V +D G    S   L +  + +S       D 
Sbjct: 212  ITTLSSAVIDGGNGWDKLSIFDEGRTDGVTIDFGQGFASTGTLISGIEVASVDLGGGSDT 271

Query: 3089 RIEIAADGSLLDHRSATDDSLLVAGNSGMTLLSGSGDDFVQGGAGDDVLVGGLGADILVG 3148
             I  A + S L       D+ +  G+    + SGSGDD + GGAGDD+L+   G D+L G
Sbjct: 272  LI--AGNLSSLTAHMGDGDNYVAGGSGRDYVASGSGDDALYGGAGDDILISAGGNDVLAG 329

Query: 3149 GTGADMFKWTLDGVDDKVDHIRDFNVNEGDSIDLIDVVQDLG 3190
            G G D      DG     D     +   GD  DLI VV   G
Sbjct: 330  GDGNDEI---YDGGTSFGDGETYIDGGAGD--DLIQVVAPSG 366



 Score = 39.3 bits (90), Expect = 2e-06
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 3100 DHRSATDDSLLVAGNSGMTLL-SGSGDDFVQGGAGDDVLVGGLGADILVGGTGADM 3154
            D  S T++   + G +G   + +G GDD V GGAG+D L    G D L GG G D+
Sbjct: 22   DTLSGTEEKDRIWGLAGADEIDAGGGDDLVDGGAGNDRLTSRSGYDRLDGGEGDDL 77



 Score = 34.3 bits (77), Expect = 8e-05
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)

Query: 3085 SIDYRIEIAADGSLLDHRSATDDSLLVAGNSGMTLLSGSGDDFVQGGAGDDVLVGGLGAD 3144
            S D R        ++ + +A  + +       + L +GSG+D + G A DD++  G G D
Sbjct: 104  SSDVRFSGEHGHGIIGYNTANWEHIFFNRIERLVLTTGSGNDRIFGAATDDIISTGAGND 163

Query: 3145 ILVGGTGADMFKWTLDGVDDKVDHIRDFNVNEGDSIDLID 3184
            + VG  G D         DD    + D  ++ G   D+I+
Sbjct: 164  V-VGPYGVD--------GDDGTSMLGDDAIDTGSGGDIIN 194



 Score = 30.0 bits (66), Expect = 0.001
 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 9/50 (18%)

Query: 3107 DSLLVAGNSGMTLLSGSGDDFVQGGAGDDVL---------VGGLGADILV 3147
            D L+  G     L S SG D + GG GDD++          GG G D LV
Sbjct: 48   DDLVDGGAGNDRLTSRSGYDRLDGGEGDDLISLIGTGGAVTGGAGVDTLV 97



 Score = 27.3 bits (59), Expect = 0.009
 Identities = 48/186 (25%), Positives = 73/186 (39%), Gaps = 38/186 (20%)

Query: 3032 TAGSVTDLGNGRWEVSPDALESLKVVGLDEGVHTLSLTALSTES------DGSSAPSANS 3085
            T G   D G G +  +   +  ++V  +D G  + +L A +  S      DG +  +  S
Sbjct: 237  TDGVTIDFGQG-FASTGTLISGIEVASVDLGGGSDTLIAGNLSSLTAHMGDGDNYVAGGS 295

Query: 3086 -IDYRIEIAADGSLLDHRSATDDSLLVAGNS---------------------GMTLLSG- 3122
              DY    + D +L  +  A DD L+ AG +                     G T + G 
Sbjct: 296  GRDYVASGSGDDAL--YGGAGDDILISAGGNDVLAGGDGNDEIYDGGTSFGDGETYIDGG 353

Query: 3123 SGDDFVQGGAGDDVLVGGLGADIL-----VGGTGADMFKWTLDGVDDKVDHIRDFNVNEG 3177
            +GDD +Q  A    + GG G+D L     + GT  D    TL G      +I  F ++ G
Sbjct: 354  AGDDLIQVVAPSGFIDGGGGSDTLRVVDPLPGTNFDASTGTL-GTTLIFTNIERFELSGG 412

Query: 3178 DSIDLI 3183
               D I
Sbjct: 413  SGNDSI 418