Pairwise Alignments

Query, 3263 a.a., type I secretion C-terminal target domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., RTX toxins and related Ca2+-binding proteins from Phaeobacter inhibens DSM 17395

 Score = 62.4 bits (150), Expect = 4e-13
 Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)

Query: 2995 LSAQGIALLGA--IAALTDL-HETLSLRVDHLPAGASLSSTAGSVTDLGNG---RWEVSP 3048
            L A G+ +  A  IA LT + H  +++  D   +     STA ++    +G   + +V  
Sbjct: 99   LDASGVLIPAAQIIAGLTGVTHHQVTINADGTVSIEGEGSTAANIGVAIDGPISQLDVIF 158

Query: 3049 DALESLKVVGLDEGVHTLSLT---ALSTESDGSSAPSANSIDYRIEIAADGSLLDHRSAT 3105
            D      + G   G+   + +   AL    +G+ A     IDY  +   +G  +D   A 
Sbjct: 159  DNGSDAPITG-GAGLSDFTFSIPPALDYVVEGTDAGERIDIDYLGD--PEGDRVDSGDAA 215

Query: 3106 D---DSLLVAGNSGMTLLSGSGDDFVQ---------GGAGDDVLVGGLGADILVGGTGAD 3153
            D   D ++VAG    T+L+G GDDFV          GGAG+D L GG G D+L GG G D
Sbjct: 216  DGSQDDVIVAGGGNDTVLAGEGDDFVDAGTGDDSVEGGAGNDTLFGGGGRDLLQGGAGND 275

Query: 3154 MFKWTLDG 3161
            + +  +DG
Sbjct: 276  LLQGGIDG 283



 Score = 53.1 bits (126), Expect = 2e-10
 Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 24/176 (13%)

Query: 3017 SLRVDHLPAGASLSSTAGSVTDLGNGRWEVSPDALESLKVVGLDEGVHTLSLTALSTESD 3076
            S+  D +  GA     AGS      G  E+     + L  +G+ E    + L   +   D
Sbjct: 379  SMGTDTVWGGAGNDILAGS-----QGNDEIHGGDGDDLAFIGVYEDSDRIFLDDGNDFLD 433

Query: 3077 GSSAPSANSIDYRIEIAADGSLLDHRSATDDSL-------LVAGNSGMTLLSGSGDDFVQ 3129
            GSSA S+    +  E      +++     D  L       L  G  G +L  GS DD ++
Sbjct: 434  GSSAGSS----FYGEGGRGNDVMNSGVGNDTLLGGEGYDRLSGGTGGDSLDGGSEDDVIE 489

Query: 3130 GGAGDDVLVGGLGADILVGGTGADMFKWTLDGVDDKVDHIRDFNVNEGDSIDLIDV 3185
            GG G D L+GG GAD L G    D+F   + G  D VD         GD  D +D+
Sbjct: 490  GGGGADTLIGGTGADSLYGDDDRDLF---IGGAGDVVD-----GGEGGDDYDRLDI 537



 Score = 44.3 bits (103), Expect = 1e-07
 Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 3100 DHRSATDDSLLVAGNSGMTLLSGS-GDDFVQGGAGDDVLVGGLGADILVGGTGADM 3154
            DH    D   L+ G  G   L GS G D V GGAG+D+L G  G D + GG G D+
Sbjct: 356  DHVFGRDQDDLIYGEGGNDTLIGSMGTDTVWGGAGNDILAGSQGNDEIHGGDGDDL 411



 Score = 35.0 bits (79), Expect = 7e-05
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 3119 LLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGADMFKWTLDGVDDKVDHIRDFNVNEGD 3178
            + +G GDD V G   DD++ G  G D L+G  G D   W   G D       +  ++ GD
Sbjct: 349  IYAGEGDDHVFGRDQDDLIYGEGGNDTLIGSMGTDTV-WGGAGNDILAGSQGNDEIHGGD 407

Query: 3179 SIDL--IDVVQD 3188
              DL  I V +D
Sbjct: 408  GDDLAFIGVYED 419