Pairwise Alignments

Query, 3263 a.a., type I secretion C-terminal target domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Hemolysin-type calcium-binding repeat (2 copies). from Phaeobacter inhibens DSM 17395

 Score = 54.7 bits (130), Expect = 3e-11
 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 2/65 (3%)

Query: 3090 IEIAADGSLLDHRSATDDSLLVAGNSGMTLLSGSGDDFVQGGAGDDVLVGGLGADILVGG 3149
            IE  A    LD  SA D+  +  G+   T++ G+GDDF++G AGDD L+   GAD LVGG
Sbjct: 80   IEGGAGDDRLDGGSADDN--VFGGDGDDTMVGGNGDDFMRGNAGDDTLIDTRGADHLVGG 137

Query: 3150 TGADM 3154
             G D+
Sbjct: 138  QGNDL 142



 Score = 31.2 bits (69), Expect = 3e-04
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 3114 NSGMTLLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGADMFKWTLDGVDDKVDHIRDFN 3173
            N   T    +  D +  GAGDD ++ G   D + GG+G D F+      +D+   I DF 
Sbjct: 175  NFDYTADQDAAGDTINAGAGDDSVLFGHN-DTVTGGSGNDSFETGAWLTEDEQATITDFT 233

Query: 3174 VNEGDSIDLIDVVQD 3188
             ++   +   D  +D
Sbjct: 234  ADDDRVVYYYDENED 248