Pairwise Alignments
Query, 3263 a.a., type I secretion C-terminal target domain-containing protein from Vibrio cholerae E7946 ATCC 55056
Subject, 1553 a.a., putative outer membrane adhesin like proteiin (RefSeq) from Shewanella loihica PV-4
Score = 112 bits (280), Expect = 7e-28
Identities = 300/1340 (22%), Positives = 489/1340 (36%), Gaps = 270/1340 (20%)
Query: 1 MQSQVVTQPVTVTSLSGNVVVVNAQGQARIVNAGDVLQPDEIIITVNQSAIELQTTQGGV 60
M + + TQ V +L G + V + QG R V GD++ E +I + L+ G
Sbjct: 3 MGASITTQDAVVVNLVGELKVKDEQGNIREVKIGDLIHAGEQLIFSPNAKFNLEYEDGSS 62
Query: 61 QIDENCVACLPEFSADGQPEVQAAPVQGQINLDLAQLDTANFDEQAIAAIQQAILDGVDP 120
N L + + + V Q Q + Q +T + IAA+Q IL G DP
Sbjct: 63 TTQAN----LMQDTLNQDTTVSQDTGQEQQSDAAPQTNTPVALDPEIAALQAQILAGEDP 118
Query: 121 TTALEAAAAGAGA-GGSANGGAITIDYNFLEVLASTAFDTQGYNQTFSTT--QTLVNPLR 177
T L AAGAG + +++ E LA +DT G+ T TT + ++ L+
Sbjct: 119 TQGLPETAAGAGTPTNQGDAYFVSVGRTGDETLADAGWDTAGFPLTPDTTVEEVIIPELQ 178
Query: 178 FAAGGESLST-QVTEGSLSLGTYPQ---TSTVTSLITAGSLALLPASFVPEAAFLTSLLA 233
+A S +T + E +L+ G+ P T+ ++ TA +
Sbjct: 179 PSAPTVSSATFSLFEANLAQGSSPSALLTNFANNIQTAADAGI----------------- 221
Query: 234 ELNQDITSSGQPVVFRYDAATNSIIGEQNGSTVLSIAISAESIGRDVNLTITTTLSQPID 293
+T +G ++ A +I NG VL+I + G+ T + D
Sbjct: 222 ---SSLTINGINIISGGQFAGPIVINTPNG--VLTITGFDSASGQ---FTYDYAFNSSAD 273
Query: 294 HLPSVGGGLVSISGDQISIALQLTGTDSNGNVIQAPIDVVVAINDGSAPVMVDEPTLSLN 353
H +GDQ+ + D+ G++ I V +
Sbjct: 274 H----------SAGDQLQFLFNIELVDNQGDIATGTITVNII------------------ 305
Query: 354 ENDLPAGSDGADPLTVSGQFDTQLGSDQVASYQIDPSTANPIAGLT-SQGDAVILGEPTL 412
+D P G ++ +T + + + V I + + + +T SQG ++ LGE
Sbjct: 306 -DDQPEGFADSNAVT---EDTATVATGNVLGNDIQGADSAEVTAVTNSQGTSISLGETNS 361
Query: 413 IDGNRVYQATAGGRDIFQLTLNADGSYQFVL---QGTLDHAAGSDALTISLPIVAIDYDN 469
I G LTL ADGSY + L + A +T + + D D
Sbjct: 362 IQG-----------QFGVLTLFADGSYSYQLNNGSSAVQSLALGQQITETFNYLLTDSDG 410
Query: 470 DS-SAPGNLNIEIQDDKPII---IGAEQLTVAEQ-TLDTGSIGGGASLVADGNFTTTQGS 524
DS P + I +D PII I A +V E +D G++ SLV G T
Sbjct: 411 DSVLVPLTITITGTNDTPIITSNIEAATGSVLEAGVMDGGNVPEPGSLVTGGTLTAAD-- 468
Query: 525 DGVVSYRLDSLTDSVAGITSGGVAVTLSESVDANGNYTYTATAGGEPVFTLLLNQDGSYR 584
D+ A T GV V G ++ A+ G +
Sbjct: 469 -----------VDNGASWTWSGV-----PQVSDYGTFSINAST-------------GEWS 499
Query: 585 FTLQGSLDHALNSDELLVNFTVVATDFDGDTASITLPVTVKDDK-PYFTNVTSLNV-HEN 642
+TL +D LV+ G+T T VTV D+ Y T + ++ V N
Sbjct: 500 YTL---------ADNALVDALA-----QGETHEETFLVTVTDEHGAYSTQLVTVTVTGTN 545
Query: 643 DLPQGSDVTKEPLTASGQFELVQGSDRVASFTLDSSVNPVQGLTSNGVAVTLSAPVDDGH 702
D+P + E GS A +D P G G +T +A VD+G
Sbjct: 546 DIP----------VITSNIEAATGSVLEAG-VMDGGNVPEPGSLVTGGTLT-AADVDNG- 592
Query: 703 GNLTYTAMAGAVTVFTLTLN-TDGTYSFTLA--APVDHALNSNDLTLNFQVIATDFDGDS 759
+ T++ + T ++N + G +S+TLA A VD F V TD G
Sbjct: 593 ASWTWSGVPQVSDYGTFSINASTGEWSYTLADNALVDALAQGETHEETFLVTVTDEHGAY 652
Query: 760 DSIVLPVKINDDKPYFTNVQGLYVHENDLPQGSDTDKEPVTVNGQFQLVQGADTVASFAL 819
+ ++ V + ND+P + + G+ A
Sbjct: 653 STQLVTVTVTG--------------TNDIP----------VITSNIEAATGSVLEAGVMD 688
Query: 820 DSSVNPVQGLTSNGVAVTLSAPVDDGNGNLTYTAMAGSVTVFTLTLN-SDGTYSFTLAAP 878
+V L + G TL+A D + T++ + T ++N S G +S+TLA
Sbjct: 689 GGNVPEPGSLVTGG---TLTAADVDNGASWTWSGVPQVSDYGTFSINASTGEWSYTLA-- 743
Query: 879 VEHALNSDSLTLNFKVIATDFDGDTASIVLPVTVLDDQPSVISAQALSVNEDDLATGTDQ 938
++AL DSL G+T VTV D+ S Q ++V TGT+
Sbjct: 744 -DNAL-VDSLA----------QGETHEETFLVTVTDEH-GAYSTQLVTVT----VTGTND 786
Query: 939 SKESTTANGQFTTTQGADGIAHYQIDTSTSSNTGLTSQGQPVVWGAPSITTTSSGQVYTY 998
T + + A G ++ + G V G + +G +T+
Sbjct: 787 IPVIT------SNIEAATGSV---LEAGVMDGGNVPEPGSLVTGGTLTAADVDNGASWTW 837
Query: 999 QGIANGVVIFTLVLRAD-GSYSFTL--NGAVDHPL--NANELTLNIPVLAQDADGDTSPI 1053
G+ T + A G +S+TL N VD +E T + V + T +
Sbjct: 838 SGVPQVSDYGTFSINASTGEWSYTLADNALVDALAQGETHEETFLVTVTDEHGAYSTQLV 897
Query: 1054 TLPVTIVDDVPILHDKNIALQEGSVASSVNLFSRDNNLSPDTQGADRGVITHFSAVDE-- 1111
T+ VT +D+P+L ++ + L + D++ D D G ++ DE
Sbjct: 898 TVTVTGTNDIPVL----------TIDKTSGLVTEDDS---DPMLTDTGTLSFTDVDDEYL 944
Query: 1112 ---AGRDIQFREGSVLSNDIELNGAAKTVTVVEIVNGVSRDLGTLTIQPNGTATFTPVTQ 1168
G D+ S ++N + +G +I + +S D I +G + +
Sbjct: 945 PEYVGHDL---SASYVANSLMWSGG-------DITDVLSADQIQALI--DGFSVYQ---- 988
Query: 1169 LDHTDGNDIKFTVDVTATDYDHDTSTEQLNITIYDHKATITQQKFT----GYED--QGHD 1222
DH D + + V A ++T T ++T+ D Q T G D +G
Sbjct: 989 -DHWDYSILNSLVQFLAA---NETITLSFDVTVADKHGAYDTQTVTITINGNNDPIEGEF 1044
Query: 1223 AALNLVPAGEQSNAQDNLGGLPV-----------EALKL-ALQVNLYDVDQGESLGEVSI 1270
A VPA A L G P+ + + + L ++ D D+ +GE I
Sbjct: 1045 AKEIWVPASLAEIAIPYLDGYPLGIDVPTDQDYNDVITITGLSLSFVDPDETADIGE--I 1102
Query: 1271 WNPNQIRGDFYYLDSANQLV 1290
W + G D N +V
Sbjct: 1103 WYVDDNTGVLTLYDFDNPVV 1122
Score = 70.5 bits (171), Expect = 3e-15
Identities = 320/1467 (21%), Positives = 534/1467 (36%), Gaps = 274/1467 (18%)
Query: 1945 LLVENAGSVTQTVQADANGKIDFTINNVSGGQ-AGANVIR----------FDNLDSNTAG 1993
LL A ++ A + IN +SGGQ AG VI FD+
Sbjct: 205 LLTNFANNIQTAADAGISSLTINGINIISGGQFAGPIVINTPNGVLTITGFDSASGQFTY 264
Query: 1994 SYQSDELVDQLVVSFGNVPQEVLNQLLITGAINNGDGTWTITNEADFSIKAPNGLVYSSN 2053
Y + D S G+ Q + N L+ + GT T+ D P G
Sbjct: 265 DYAFNSSADH---SAGDQLQFLFNIELVDNQGDIATGTITVNIIDD----QPEGFA---- 313
Query: 2054 NDPDKNGFNDIKITI-TAKVYD---QGEDSSEVK-ITKQVSTELTLSFPTEVTGNNSVAA 2108
D N + T+ T V QG DS+EV +T T ++L + G V
Sbjct: 314 ---DSNAVTEDTATVATGNVLGNDIQGADSAEVTAVTNSQGTSISLGETNSIQGQFGVLT 370
Query: 2109 QLNWVGDADDLVIGKED-NTVNLGQQIQDK---LMVNATGFDAVADELSIVINAS-DLPA 2163
+ L G ++ LGQQI + L+ ++ G D+V L+I I + D P
Sbjct: 371 LFADGSYSYQLNNGSSAVQSLALGQQITETFNYLLTDSDG-DSVLVPLTITITGTNDTPI 429
Query: 2164 GASIGGQDFNFVDGHYVFKGTLNPDGSISGLEGLVLIPPRDFAGDFKLPITFVTTDTQSG 2223
S + G + G + DG G V P G T D +G
Sbjct: 430 ITS----NIEAATGSVLEAGVM--DG------GNVPEPGSLVTGG-----TLTAADVDNG 472
Query: 2224 DEKTLTAQVPVAISPVADVPSSSGDQPL---DNHVTPSITLNVQETLGLDANHQPTDLAN 2280
T + V+ + +S+G+ DN + + L H+ T L
Sbjct: 473 ASWTWSGVPQVSDYGTFSINASTGEWSYTLADNALV--------DALAQGETHEETFLV- 523
Query: 2281 DTPTQDGIAYEDGIVHLNLAIGLADSLNGSTQGQEVLTEVTLTLNDTNSGVFVDANGQSL 2340
T T + AY +V + + + + T E T L + G + SL
Sbjct: 524 -TVTDEHGAYSTQLV--TVTVTGTNDIPVITSNIEAATGSVLEAGVMDGGNVPEPG--SL 578
Query: 2341 GTSITLTQAELPAALGEIYFKPAPNYPSGNDINTVGMTVTGKVTDSTVFDETNASLQGVS 2400
T TLT A++ + P +D T + + T+ D NA + ++
Sbjct: 579 VTGGTLTAADVDNGASWTW----SGVPQVSDYGTFSINASTGEWSYTLAD--NALVDALA 632
Query: 2401 SSDA-DKTFTSQVSFEVKPVVDDITIGSGSPISVTGDEDSWIALAD----QGNAFNVSLN 2455
+ ++TF V+ E + ++VTG D + ++ G+ +
Sbjct: 633 QGETHEETFLVTVTDEHGAYSTQLVT-----VTVTGTNDIPVITSNIEAATGSVLEAGVM 687
Query: 2456 DNDGSEQFVSLVLTGLPTDFLVKSLSS----------DYVVK--NNGGGEWSVQIRNPNL 2503
D + SLV G T V + +S DY N GEWS + + L
Sbjct: 688 DGGNVPEPGSLVTGGTLTAADVDNGASWTWSGVPQVSDYGTFSINASTGEWSYTLADNAL 747
Query: 2504 TSLDLSALAIKPTKDFSGEVQLGIKVFTQESLLGEPVEHTGQFT---LNVTPIGDDVDIA 2560
+ +LA GE +E+ L + G ++ + VT G + DI
Sbjct: 748 ----VDSLA-------QGETH-------EETFLVTVTDEHGAYSTQLVTVTVTGTN-DIP 788
Query: 2561 PIT-NVVGNEGQAIDISL--GAQILDKAPSLPGGVTYTENSPETLRVEISGVPDGAFLSL 2617
IT N+ G ++ + G + + + GG + SGVP +
Sbjct: 789 VITSNIEAATGSVLEAGVMDGGNVPEPGSLVTGGTLTAADVDNGASWTWSGVPQ-----V 843
Query: 2618 AD-GTLGTSLGGGVWVFEINAQQLDKVVFNSGDNNQLNWNGNLHFKVQSVDTGLAGDQHL 2676
+D GT + G W + + L + G H + V D+H
Sbjct: 844 SDYGTFSINASTGEWSYTLADNALVDALAQ----------GETHEETFLVTVT---DEH- 889
Query: 2677 GSAQEFDVHVDVTAVNDRPELI--NVQDQVTEEDT-PLLLNSFTLA--DIDAQL------ 2725
G+ V V VT ND P L VTE+D+ P+L ++ TL+ D+D +
Sbjct: 890 GAYSTQLVTVTVTGTNDIPVLTIDKTSGLVTEDDSDPMLTDTGTLSFTDVDDEYLPEYVG 949
Query: 2726 DDPNADYTLQIGVNSGVLIID-------SSLSSGLTIQGDGTGALSITGNVAEINAAIGA 2778
D +A Y + SG I D +L G ++ D SI ++ + AA
Sbjct: 950 HDLSASYVANSLMWSGGDITDVLSADQIQALIDGFSVYQDHWD-YSILNSLVQFLAANET 1008
Query: 2779 GLVKF-VPSPDFYGQ-----VAVTLNVNDN---GNAGSEIAGDASTAH------------ 2817
+ F V D +G V +T+N N++ G EI AS A
Sbjct: 1009 ITLSFDVTVADKHGAYDTQTVTITINGNNDPIEGEFAKEIWVPASLAEIAIPYLDGYPLG 1068
Query: 2818 -----DNSAQFVIDVTAVN----DKPEVDGIHLTAQIDEASG---------------QKL 2853
D VI +T ++ D E I +D+ +G +L
Sbjct: 1069 IDVPTDQDYNDVITITGLSLSFVDPDETADIGEIWYVDDNTGVLTLYDFDNPVVLSASEL 1128
Query: 2854 TGITVSDVDYAGSHTNDVMKVTLSISEGILSVQAPAGSSVAVSYALDGSVILEGSPEAIN 2913
+ D AG + +T +++ G SV + +L G+ +L G + +
Sbjct: 1129 GSLVYVPGDNAGIEDQLDINLTFTVNSGSDSVDGNFVIHTVPANSLGGNTVLIG--DGSS 1186
Query: 2914 ALLNHSDSAYGLFVDATAIAGTQINLTVTAQDMGVYFENASGMALEESKTYPIQVNPVAN 2973
L + +D L V + + ++ + A D+ F+ + P + P+ N
Sbjct: 1187 PLTSGNDQDAYLTVSSAFASAINLDPSSGALDLFTDFQKS-----------PFDI-PIPN 1234
Query: 2974 APSLSMNPAFGYAQQIYANQSLSAQGIALLGAIAA--LTD--LHETLSLRVDHLPAGASL 3029
+ G ++ + L+ GI + AA +TD L H+ L
Sbjct: 1235 G---EIGGQTGIEREEEVSVRLTINGITFIVIAAANGVTDWFYDANSGLMSAHISYTNIL 1291
Query: 3030 SSTAGSVTDLGN-GRWEVSPDALESLKVVGLDEGVHTLSLTALSTESD-----GSSAPSA 3083
+ S+T G V P + ++ + D G + + + +
Sbjct: 1292 MESDNSITLADYLGANPVDPGDIWTITYLDNDGGSYQARFVQATFTHELLPDTAVTVTGT 1351
Query: 3084 NSIDYRIEIAADGSLLDHRSATDDSLLVAGNSGM-------TLLSGSGDDFVQGGAGDDV 3136
+++D I +G L + D+ GN + L+ GSGDD ++GG+G+D+
Sbjct: 1352 DNVDNLIFGTTEGDSLTGANLDDEIYGREGNDSIFGLEGDDQLIGGSGDDLIEGGSGNDI 1411
Query: 3137 LVGGL---------GADILVGGTGA-----------DMFKWTLDGVDDKVDHIRDFNVNE 3176
++GGL GADIL+GG G+ D F W + D+ +D + +F+++
Sbjct: 1412 ILGGLGNDTIDGGIGADILIGGAGSDTIDAGIDSDIDTFVWDVGSDDNSIDTVLNFDISM 1471
Query: 3177 GDSIDL--IDVVQDLGNHLTMEQLLNNLSVSNQLTAQVVDNDVTLQVTTDNQVQQTIVIE 3234
D +DL I V ++ G + + L N S N ++++ D V TIV+
Sbjct: 1472 -DKLDLSAILVDEESGVYALDQYLAFNFSGGN--------TEISVDANHDGVVDLTIVLN 1522
Query: 3235 NLATQIDFTGMSSLDIIGTLL-DQNLL 3260
N+ + T +S II LL ++NL+
Sbjct: 1523 NVDLTNNNT-LSDAQIINNLLGNENLV 1548