Pairwise Alignments

Query, 3263 a.a., type I secretion C-terminal target domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 850 a.a., Hemolysin-type calcium-binding region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 65.9 bits (159), Expect = 4e-14
 Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 5/120 (4%)

Query: 3102 RSATDDSLLVAGNSGMTLLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGADMFKWTLDG 3161
            + A  D LL  G+    L+  SG D + GGAG D L  G GADI  GGTG+D F +  D 
Sbjct: 708  KGAAGDDLLSGGDGKDKLMGYSGADVLDGGAGADRLYLGAGADIATGGTGSDRFIFRADD 767

Query: 3162 VDDKVDHIRDFNVNEGDSIDLIDVVQDLGNHLTMEQLLNNLSVSNQLTAQVVDNDVTLQV 3221
            +D   D I DF  N G   D +D+    G  L  + +  +L ++  +T Q  D  VT+ +
Sbjct: 768  LDGSTDRITDFR-NAGGEKDRLDL---RGLDLLSDDMTADLWIATYVT-QGADRSVTVDL 822



 Score = 43.9 bits (102), Expect = 2e-07
 Identities = 20/35 (57%), Positives = 23/35 (65%)

Query: 3119 LLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGAD 3153
            L  G GDD++ G AG D L GG+G D L GGTG D
Sbjct: 572  LFGGEGDDYLSGSAGHDSLHGGVGNDTLDGGTGFD 606



 Score = 40.0 bits (92), Expect = 2e-06
 Identities = 20/49 (40%), Positives = 25/49 (51%)

Query: 3106 DDSLLVAGNSGMTLLSGSGDDFVQGGAGDDVLVGGLGADILVGGTGADM 3154
            DD  L  G     L   +G D + GG G+D L GG G D L G +G D+
Sbjct: 568  DDDRLFGGEGDDYLSGSAGHDSLHGGVGNDTLDGGTGFDTLFGDSGDDI 616



 Score = 30.4 bits (67), Expect = 0.002
 Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 9/120 (7%)

Query: 826 VQGLTSNGV-AVTLSAPVDDGNGNLTYTAMAGSVTVFTLTLNSDGTYSF---TLAAPVEH 881
           V G    GV A+T  A V DG+GNL      G   + + T +S G Y     T    +  
Sbjct: 386 VAGQMLEGVPAITFGAFVVDGDGNLYAGGNGGDHDMNSATKSSGGIYKVRTDTETGEITL 445

Query: 882 ALNSDSLTLNFKVIATD---FDGDTASIVLPVTVLDDQPSVISAQALSVNEDD-LATGTD 937
            L SD+   N    A D    D  TA      TVL   P V++A   S + DD + +G D
Sbjct: 446 ELVSDAPKANSNDGAVDPRTMDPFTAK-DRSATVLIRSPEVVAAPDDSTSYDDKIHSGAD 504