Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 61/154 (39%), Positives = 80/154 (51%), Gaps = 6/154 (3%)

Query: 144 SERDKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDHFGHMIGDEI 203
           SE D LT   NRR L   L    A    + +   LW AMLD+DHFK+IND  GH +GD +
Sbjct: 181 SETDTLTHAPNRRALVAGLNTALA----SADKSSLWFAMLDLDHFKSINDTHGHDVGDNV 236

Query: 204 LLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIRRHNFPRIGEL 263
           L+ FA  ++   G  S   R GGEEF +I S+ N       L+G    + +H+       
Sbjct: 237 LISFATLLKSTKGLIS-FGRLGGEEFGVILSAANATDAIHALEGL-LMLAQHDDAAQVPY 294

Query: 264 SFSAGFCSLRPGDYLPTILDHADKALYYAKEHGR 297
           SFS G  SL   + +  +L  AD+ LYYAK  GR
Sbjct: 295 SFSGGVASLSRVETINDLLKEADENLYYAKRSGR 328