Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 19/177 (10%)

Query: 144 SERDKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDHFGHMIGDEI 203
           S+ D LTGLLNRR    + R    +  +  +   L +A+LD+D FKAIND  GH +GD +
Sbjct: 451 SDTDPLTGLLNRRAFLHQARQMQRL--AERQQFPLSVALLDLDFFKAINDKHGHHVGDAV 508

Query: 204 LLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIRR------HNF 257
           L  FA   +     +  + RFGGEEF+++ ++  +P I     G  Q+++R         
Sbjct: 509 LRAFAHGAKTTLRQTDIIGRFGGEEFILL-ATEKDPII---FAGLLQRVQRAFTHACQQD 564

Query: 258 PRIG-ELSFSAGFCSLRP--GDYLPTI---LDHADKALYYAKEHGRNQVHCYEQLCE 308
           P IG  +SFSAG  +L       +P I   +  AD+ LY AK +GR QV C + LC+
Sbjct: 565 PAIGFSVSFSAGIAALEDNGATEIPDIEEAIRQADELLYRAKANGRQQV-CTDSLCQ 620