Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  142 bits (358), Expect = 1e-38
 Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 26/332 (7%)

Query: 3   DKVLESVIEITEQKNSLALSYSILATLSELLPLSTATLFH-----HLGRSTLMVARLIIT 57
           + +L SV  ITEQ+   +L+  ++ T+ + L +    + +     H  +       ++  
Sbjct: 6   EHILNSVASITEQRQLQSLATCLIETIEQTLGVKQVAVINVGDLPHFPKFLTSTDFVLAL 65

Query: 58  KNAAGKKEYQWQYDQVCADNGYQHSQSEMAFSQQANGQYQCFCPIPIEEHFSA-ELCLIL 116
            N            Q C D G      + A  +Q     +C   +P++ + +  ++ L+ 
Sbjct: 66  DNPP-------PCVQRCIDTG------KNAICEQDE---RCKVALPVKMNDAVVKVLLVY 109

Query: 117 NKDPEPYR-MLINGFAKIYRNYTVILHESERDKLTGLLNRRTLEDRLRHTFA-INPSTEE 174
           + D      M++  FA+IY N+  ++ +S+ D LTGLLNR+  + RL H F+ I   T  
Sbjct: 110 DLDLNNANLMMLQAFARIYENFARVVLDSQTDGLTGLLNRKAYDARLFHLFSHIRTETRR 169

Query: 175 NHKLWIAMLDIDHFKAINDHFGHMIGDEILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFS 234
               W+   DID FK IND  GH+ GDE+LL  ++ M   F     LFRFGG+EFV++  
Sbjct: 170 APYFWMLTFDIDFFKKINDTLGHLYGDEVLLRISRAMNDCFSDDDALFRFGGDEFVVLLD 229

Query: 235 SGNEPQIKQQLDGFRQQIRRHNFPRIGELSFSAGFCSLRPGDYLPTILDHADKALYYAKE 294
           + ++ +++         + + +  + G ++ S G  SL   D   +++  ADKALY+AK+
Sbjct: 230 NKSQHEVECICRKLMADVGKVHHEKTGPVTLSIGITSLTLEDNPMSVMMKADKALYFAKD 289

Query: 295 HGRNQVHCYEQLCENGKIASAQRPFSDDVELF 326
           +GRN+   Y  L  +G +   Q    DD+ELF
Sbjct: 290 NGRNRWAFYHDLFHHGDLLPTQ--IDDDIELF 319