Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 147 DKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDHFGHMIGDEILLM 206
           D LTG LNRR  +          P T     ++ A++D+DHFK IND +GH  GD +L+ 
Sbjct: 137 DPLTGALNRRAFKA---------PKTHSGSTVF-ALVDVDHFKRINDTYGHDAGDFVLVE 186

Query: 207 FAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIRRHNFPRIGE---L 263
            A+ + ++     Q FR+GGEEF++ F      Q  ++++  RQ +   +F   G+   +
Sbjct: 187 LAKLISNHIREDDQFFRWGGEEFLLEFRQAELAQASKRMEALRQLVESSHFNLNGQAINI 246

Query: 264 SFSAGFCSLRPG-DYLPTILDHADKALYYAKEHGRNQV 300
           + SAG   + P    L   L  AD+ALY AK+ GRN++
Sbjct: 247 TISAGLTCVSPNHGGLEKALKAADEALYRAKDSGRNRI 284