Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 21/185 (11%)

Query: 143 ESERDKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIA--------MLDIDHFKAINDH 194
           +++RD LTGL NRR ++ +L          E+ H+ W+         + D+D FK IND 
Sbjct: 227 QADRDYLTGLWNRRAMQQQL----------EQLHQRWLRDGQAYSLILFDLDFFKQINDK 276

Query: 195 FGHMIGDEILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIRR 254
           FGH  GD +L+  AQQ+           R GGEEF+++    +    +      +Q +R+
Sbjct: 277 FGHSAGDAVLVKTAQQIGKVTRAMDIFCRLGGEEFLLVLPGTDGEVAEIIAQKLQQALRQ 336

Query: 255 HNFPRIGEL---SFSAGFCSLRPGDYLPTILDHADKALYYAKEHGRNQVHCYEQLCENGK 311
            +    G L   S S G  +   GD   ++L  ADKA+Y AKE GR++    E+  E  +
Sbjct: 337 SSLNWQGSLIPISASFGIVTTATGDTPDSLLALADKAMYRAKETGRDRCCTAERRLEQAQ 396

Query: 312 IASAQ 316
              +Q
Sbjct: 397 ATPSQ 401