Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 19/174 (10%)

Query: 140 ILHESERDKLTGLLNRR---TLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDHFG 196
           + H +  D LT   NRR    + +RL H       +++  +L + ++D+D+FK IND +G
Sbjct: 142 LTHHAIYDDLTQFYNRREGIAIGERLYHA-----CSQQLGELGVILIDVDYFKLINDTYG 196

Query: 197 HMIGDEILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSS--GNEPQIKQQLDGFRQ---- 250
           HM+GD+ L   A  ++    P   L R+GGEEFV++ +   G +   +  L+   Q    
Sbjct: 197 HMVGDDALRHIAATLKQQQDPEDVLMRWGGEEFVVLVNRPFGTDQDFETYLEARAQVYCD 256

Query: 251 QIRRHNFPRIG----ELSFSAGFCSLRPGDYLPTILDHADKALYYAKEHGRNQV 300
            IR + F +IG    +++FS G  S  PG  L  +L  AD ALY AK+ GR+ V
Sbjct: 257 AIRENRF-QIGDDALQITFSCGLSSFEPGKSLTQMLHDADAALYRAKDAGRDNV 309