Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score = 94.7 bits (234), Expect = 4e-24
 Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 8/162 (4%)

Query: 143 ESERDKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDHFGHMIGDE 202
           ++  D LT + NRR +  +L    AI+ S  +   L + + DIDHFKA+ND  GH++GD+
Sbjct: 336 QANTDPLTKVANRRAINRQL--AAAISRSNRQQTPLAVCIFDIDHFKAVNDKHGHLVGDD 393

Query: 203 ILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIRRH----NFP 258
           +L   A+        +  + R+GGEEFVII    ++   K   D  RQ+++R     +FP
Sbjct: 394 VLQRVAKIFSDAIRKTDFVGRWGGEEFVIILEDTDKEGAKHFADKLRQEVKRRSQGIDFP 453

Query: 259 RIGELSFSAGFCSLRPGDYLPTILDHADKALYYAKEHGRNQV 300
               ++ SAG       D    + +HAD+ALY AKE GR+ V
Sbjct: 454 --VAITLSAGVSVYCQDDKQDCLFNHADQALYRAKESGRDCV 493