Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score = 91.3 bits (225), Expect = 8e-23
 Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 15/170 (8%)

Query: 142 HESERDKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDHFGHMIGD 201
           H +  D+LT L NR  L DR+ H  A+  S +++  L +  +DIDHFK +ND  GH  GD
Sbjct: 391 HLANHDQLTDLPNRILLHDRINHACAVADSYDKSVALML--IDIDHFKYLNDSLGHSYGD 448

Query: 202 EILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQI-RRHNFP-R 259
           +++   A+++Q    P++ L R GG+EFV++  S        Q+D     I R  N P R
Sbjct: 449 QVIKQVAKRLQSLIDPNATLGRIGGDEFVLLLPS---LTATSQVDSIATDIVRSLNTPFR 505

Query: 260 IG----ELSFSAGFCSLRPGDYL--PTILDHADKALYYAKEHGRNQVHCY 303
           I      LS S G  S+ P D L    ++ H D A+Y AK+ GRN+  CY
Sbjct: 506 IDGQEYTLSVSVGI-SIYPSDALRAEELMTHVDAAMYRAKDLGRNR-FCY 553