Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 62/170 (36%), Positives = 86/170 (50%), Gaps = 8/170 (4%)

Query: 140 ILHESERDKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDHFGHMI 199
           +  +S  D LTG+ NR   + RL     I  S  +   + + MLDID FK+IND FGH+ 
Sbjct: 450 LTEQSTIDSLTGVKNRSAFDKRLLAESRI--SRRQETPIALLMLDIDRFKSINDQFGHLA 507

Query: 200 GDEILLMFAQQM-QHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIRRHNFP 258
           GD+ L + AQ + QH   P+  + RFGGEEF II  +       Q  +  R  +      
Sbjct: 508 GDQALKLIAQTLQQHLKRPTDLVSRFGGEEFAIILPNTTADGALQVAESIRDTVSCIGLT 567

Query: 259 RIGE---LSFSAGFCS--LRPGDYLPTILDHADKALYYAKEHGRNQVHCY 303
             G+   L+ S G  +  +    +   +L+ ADKALY AK  GRNQV  Y
Sbjct: 568 WEGKPIPLTVSIGVSADVIMNEQHSTELLEQADKALYQAKNSGRNQVKLY 617