Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (255), Expect = 9e-27
 Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 9/169 (5%)

Query: 139 VILHESER----DKLTGLLNRRTLEDRLRHTFAINPSTEENHKLWIAMLDIDHFKAINDH 194
           ++L E+ER    D LTGL NRR +ED L    A +  T+ +  L + M DID FK IND+
Sbjct: 143 LLLEENERQSKTDLLTGLANRRQIEDVLAAAMAKSDRTQSS--LCVVMCDIDFFKNINDN 200

Query: 195 FGHMIGDEILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFS---SGNEPQIKQQLDGFRQQ 251
           FGH+ GD++L + A Q+QH    ++ + R+GGEEF+I+       +   + +QL G    
Sbjct: 201 FGHLCGDDVLKIVASQLQHSAQAATCIARWGGEEFLIVLEHVVPESAGVLCEQLRGLIAA 260

Query: 252 IRRHNFPRIGELSFSAGFCSLRPGDYLPTILDHADKALYYAKEHGRNQV 300
               ++ +  +L+ S G    +  + L ++L   DKALY AK  GRNQV
Sbjct: 261 TDYQSYGQHMQLTMSFGCVQYQANESLQSLLCRVDKALYQAKNGGRNQV 309