Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 13/195 (6%)

Query: 115 ILNKDPEPYRMLINGFAKIYRNYTVILHESER----DKLTGLLNRRTLEDRLRHTFAINP 170
           +L K  E  R  +N  +     Y   L E ++    D LT L NR  LE+R+   +    
Sbjct: 324 LLRKSMETMRKELNELSNEANTYKERLFEQQKLNLLDSLTQLPNRAALEERMELEYR--- 380

Query: 171 STEENHK--LWIAMLDIDHFKAINDHFGHMIGDEILLMFAQQMQHYFGPSSQLFRFGGEE 228
              + HK  LWIA+ DIDHFK IND FGH  GD+ L + A  +++    +  + R+GGEE
Sbjct: 381 -NYQRHKSPLWIAVADIDHFKIINDSFGHSTGDKTLQVIAMALKNSLRDTEFVARYGGEE 439

Query: 229 FVIIFSSGNEPQIKQQLDGFRQQIRRHNFPRIGE---LSFSAGFCSLRPGDYLPTILDHA 285
           FV+I    ++  I Q L+  R++++   F    +   ++ S G   +   + +    + A
Sbjct: 440 FVLILPDIDDSDIAQLLNRVREKVKNIPFKFKNQRITVTVSIGAARVMGNELIHETFERA 499

Query: 286 DKALYYAKEHGRNQV 300
           D ALY AK   R++V
Sbjct: 500 DAALYKAKHESRDRV 514