Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 89.7 bits (221), Expect = 9e-23
 Identities = 59/178 (33%), Positives = 87/178 (48%), Gaps = 10/178 (5%)

Query: 135 RNYTVILHESERDKLTGLLNRRTLEDRLRHTFAINPSTEENH-KLWIAMLDIDHFKAIND 193
           R    +  + + D LTGL NRR      RH  A    T      L + +LDIDHFK++ND
Sbjct: 127 RTIEEMARQRDTDPLTGLPNRRAFA---RHLEAELERTRRGRGDLSLVILDIDHFKSVND 183

Query: 194 HFGHMIGDEILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFSSGNEPQIKQQLDGFRQQIR 253
           ++GH  GDE+LL  A Q+Q          R GGEEF I+    +  + +   +   Q+  
Sbjct: 184 NYGHPCGDEVLLRLASQLQTSVRLYDLAARIGGEEFAIVLPGASALKAQALCERILQRFA 243

Query: 254 RHNFPRIG----ELSFSAGFCSLRPGDYLPT--ILDHADKALYYAKEHGRNQVHCYEQ 305
                  G     ++FS G  +   G   P   ++D ADKALY AK+ GRN+++ + +
Sbjct: 244 STGMDCPGVPPFHVTFSGGIATCTTGVTCPASLLVDRADKALYEAKQAGRNRIYVHRE 301