Pairwise Alignments

Query, 326 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., response regulator receiver modulated diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 6/189 (3%)

Query: 115 ILNKDPEPYRMLINGFAKIYRNYTVILHESERDKLTGLLNRRTLEDRLRHTFAINPSTEE 174
           +++K   P   +    ++  R +  I   + RD LTGLLN   +    R  +  N +   
Sbjct: 353 LISKQTAPSLFVTQVISRAQRGHD-IRSSASRDSLTGLLNHTQILVAARRCY--NLAKRI 409

Query: 175 NHKLWIAMLDIDHFKAINDHFGHMIGDEILLMFAQQMQHYFGPSSQLFRFGGEEFVIIFS 234
           N  + IAMLD+DHFK +ND +GH  GD++LL FA  +Q    P   + R+GGEEF+++  
Sbjct: 410 NSSVCIAMLDLDHFKQVNDTYGHSGGDKVLLAFAHLLQQSLRPVDFMGRYGGEEFMLVLP 469

Query: 235 SGNEPQIKQQLDGFRQQIRRHNFPRIG---ELSFSAGFCSLRPGDYLPTILDHADKALYY 291
               P    +L+  R+      F   G   +++ S G       +     L  ADK LY 
Sbjct: 470 DLPAPLAIAKLNAIRESFSHIVFVEEGAEFKVTLSGGLAFSTECNEFQDCLLLADKNLYE 529

Query: 292 AKEHGRNQV 300
           AK  GRN++
Sbjct: 530 AKRTGRNRL 538