Pairwise Alignments

Query, 414 a.a., L-methionine/branched-chain amino acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., inner membrane protein YjeH (RefSeq) from Shewanella amazonensis SB2B

 Score =  231 bits (589), Expect = 3e-65
 Identities = 142/415 (34%), Positives = 229/415 (55%), Gaps = 16/415 (3%)

Query: 1   MNQLKKDISLGAGIAQLSTTLMGTGLFMVPAIAAGIAGVFSLWAWLLLFVAICPIALTFA 60
           M  +K  I    G   ++TTL+GTG+F++P +    AG  +LWAW LL +AI P+ L F 
Sbjct: 1   MEHIKGTIGRWQGAGLMATTLLGTGVFILPQMTLAKAGTSALWAWALLTLAIIPVTLVFG 60

Query: 61  QLGKRYPNAGGTAYFVRQAFNPRLERAVAWLFLSVIPVGVPAAVTLAASFLQALLPAPLA 120
           +L  R+P+A G A+FV +AF   L R++  +FL VIP+G PAA+ +   F+ ALLP    
Sbjct: 61  RLASRFPHAAGPAFFVEKAFGRTLGRSIGLIFLLVIPMGAPAAILMTFQFVTALLPLAGV 120

Query: 121 NPLLTQTLTILLLVGVNLAGTKSSGRLQTLIALAIFSLVIAFWWRGEVTTQDLVMP---A 177
             LL Q L I LL   NL G + S + Q  + L I ++V+A +    V    + +P   +
Sbjct: 121 ELLLAQLLVIGLLWFANLKGLQVSAKAQFALTLGIVAVVLALFMGLGVQHHAVELPDFES 180

Query: 178 LTQEGWVSIGAALAVMFWCFVGIEAFAHMGEEFRNPQRDFPLAILIGSFVAGLTYWACSV 237
             Q G + + A +A  FW F+G+EA  H+  +FR P++D   A+++G+ + GL Y  C+ 
Sbjct: 181 AWQTGPMMLAAGIA--FWSFLGVEAMTHLAHDFREPEKDMIPAMMLGTVLVGLIYLGCTS 238

Query: 238 VVLKFSAFGTPQFDSGAIPWLSDQLFGTRWAIMISVIGFLACFASLNLYTQSLARMVWAQ 297
           ++     +  P     A+  + D L G   A +I ++G  A  A++N+Y  S AR++W+ 
Sbjct: 239 LL-----WLVPSSTGVAMMGVFDTLLGAGGAQVIGILGVSAGLATVNVYAGSAARLLWSF 293

Query: 298 AREYRPESAIARVSIRGVPAHA-TLLVGVVLFASCFIGHLTGLDLEFFLKLANGIFVLVY 356
           +RE        R++  GVP  A T ++G +      +  +   DLE  +  +NG+FV++Y
Sbjct: 294 SREGIMPRYFQRLNDHGVPVRAQTAILGSMALVLTLV-FVFEQDLEQLIAWSNGVFVIIY 352

Query: 357 LLAMLAAFKLLTGWSKHLAGLALVLCAGVFLCLGWSMLYALGVFVLLIRP---WQ 408
            ++MLAA++LL   S+    L L  C  + + LG  M YA+ + ++L+ P   WQ
Sbjct: 353 AMSMLAAWRLLGASSRLWILLGLGFCVALGVALGGRMFYAV-LLLMLVLPLLWWQ 406