Pairwise Alignments

Query, 414 a.a., L-methionine/branched-chain amino acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., inner membrane protein YjeH (RefSeq) from Shewanella loihica PV-4

 Score =  238 bits (608), Expect = 2e-67
 Identities = 145/412 (35%), Positives = 234/412 (56%), Gaps = 18/412 (4%)

Query: 11  GAGIAQLSTTLMGTGLFMVPAIAAGIAGVFSLWAWLLLFVAICPIALTFAQLGKRYPNAG 70
           GAG+  ++TTL+GTG+F++P +    AG  +L AW+LL +AI P+ L FA+L   +P+A 
Sbjct: 13  GAGL--MATTLLGTGVFILPEMTIATAGSGALLAWILLTLAIIPVTLVFARLAGVFPHAA 70

Query: 71  GTAYFVRQAFNPRLERAVAWLFLSVIPVGVPAAVTLAASFLQALLPAPLANPLLTQTLTI 130
           G AYFV +AF     R    +FL V+P+G PAA+ +   F+ AL+P      L+T+   +
Sbjct: 71  GPAYFVEKAFGRTAGRTTGLIFLLVVPIGTPAAILMTFQFINALVPLVGWQQLMTELALL 130

Query: 131 LLLVGVNLAGTKSSGRLQTLIALAIFSLVIAFWWRGEVTTQDLVMPALTQEG--WVSIGA 188
           LLL+ +NL G + S +LQ  + LAI S+V+  +  G     DL + A  Q G     + A
Sbjct: 131 LLLLALNLKGIQVSAKLQFALTLAIVSVVVILFGAGGAKLGDLEL-AAPQAGSDMGLVMA 189

Query: 189 ALAVMFWCFVGIEAFAHMGEEFRNPQRDFPLAILIGSFVAGLTYWACSVVVLKFSAFGTP 248
           A  + FW F+GIEA  H+  +F+ P +D   A++IG+ + GL Y  C++++L       P
Sbjct: 190 AAGIAFWSFLGIEAMTHLANDFKRPDKDMLPAMIIGTILVGLVYVTCTLLLL-----FVP 244

Query: 249 QFDSGAIPWLSDQLFGTRWAIMISVIGFLACFASLNLYTQSLARMVWAQAREYRPESAIA 308
           + +  A+    D L G   A +I ++G     +++N+YT S+AR++W+ +RE        
Sbjct: 245 KGEGLAMVTAFDHLLGGYGAQVIGILGIAGGLSTVNVYTASVARLIWSFSREGVLPRYFD 304

Query: 309 RVSIRGVPAHATLLVGVVLFASCFIGHLTGLDLEFFLKLANGIFVLVYLLAMLAAFKLLT 368
           +++   VP  A + V + +     + +L G +LE  +   NG+FVL+YL++MLAA +LL+
Sbjct: 305 KLNQHRVPVRALVAVLLTMATVICLTYLLGQELEHLIAWTNGVFVLIYLVSMLAAARLLS 364

Query: 369 GWSKHLAGLALVLCAGVFLCLGWSMLYALGVFVLLIRP---WQ----VRVQT 413
                L  + +  C  + + LG +MLYAL + V ++ P   WQ    VR QT
Sbjct: 365 KRYLPLVIMGVAFCLAMAVALGANMLYAL-MLVSVLAPLLWWQKTHLVRKQT 415