Pairwise Alignments

Query, 414 a.a., L-methionine/branched-chain amino acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., inner membrane protein YjeH (RefSeq) from Shewanella oneidensis MR-1

 Score =  226 bits (576), Expect = 1e-63
 Identities = 142/404 (35%), Positives = 224/404 (55%), Gaps = 16/404 (3%)

Query: 11  GAGIAQLSTTLMGTGLFMVPAIAAGIAGVFSLWAWLLLFVAICPIALTFAQLGKRYPNAG 70
           GAG+  ++TTL+GTG+F++P +    A   +L AW LL +AI P+AL F +L   +P+A 
Sbjct: 17  GAGL--MATTLLGTGVFILPQMTIAKAHAGALIAWSLLTLAIIPVALIFGRLASVFPHAA 74

Query: 71  GTAYFVRQAFNPRLERAVAWLFLSVIPVGVPAAVTLAASFLQALLPAPLANPLLTQTLTI 130
           G AYFV +AF     R +  +FL V+P+G PAA+ +   F+ AL+P      +  + L I
Sbjct: 75  GPAYFVEKAFGRTAGRTIGLIFLLVVPMGAPAAILMTFQFVNALIPLDGWFKVSAEVLVI 134

Query: 131 LLLVGVNLAGTKSSGRLQTLIALAIFSLVIAFWWRGEVTTQDLVMPALTQEGWVSIGA-- 188
             L  +NL G + S +LQ  + L I ++V+  +  G  + Q   + +L   G   I    
Sbjct: 135 FGLFLLNLRGIQVSAKLQFGLTLCIVAIVVVLF--GASSLQPGHLTSLASYGTPEISTMM 192

Query: 189 -ALAVMFWCFVGIEAFAHMGEEFRNPQRDFPLAILIGSFVAGLTYWACSVVVLKFSAFGT 247
            A  + FW F+GIEA  H+ ++FR PQ+D   A+++G+ + G+ Y AC++++L       
Sbjct: 193 IAAGIAFWSFLGIEAMTHLADDFRRPQQDMIPAMMMGTVLVGIIYVACTLILLL-----V 247

Query: 248 PQFDSGAIPWLSDQLFGTRWAIMISVIGFLACFASLNLYTQSLARMVWAQAREYRPESAI 307
           P  +S A+  + D L G   A +I V+G  +  A++N+Y  S AR+VW+ + E       
Sbjct: 248 PTDNSVAMIGVFDALLGGYGAQVIGVLGIASGLATVNVYAASAARLVWSFSCEGILPRCF 307

Query: 308 ARVSIRGVPAHATLLVGVVLFASCFIGHLTGLDLEFFLKLANGIFVLVYLLAMLAAFKLL 367
           A  +  GVP  A   +  V+ +   + H+TG +LE  +  +NG+FV++YL+AMLAA KLL
Sbjct: 308 AVKNRHGVPIRALGALLSVMASVIVLTHITGQELEHLIAWSNGVFVVIYLMAMLAAAKLL 367

Query: 368 TGWSKHLAGLALVLCAGVFLCLGWSMLYALGVFVLLIRP---WQ 408
              +  L  L    C  + + LG SM Y L V +L + P   WQ
Sbjct: 368 PRHNLPLVVLGCGFCLALGIALGASMAYVL-VLILFVAPFLWWQ 410