Pairwise Alignments

Query, 414 a.a., L-methionine/branched-chain amino acid transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., inner membrane protein YjeH (RefSeq) from Shewanella sp. ANA-3

 Score =  224 bits (572), Expect = 3e-63
 Identities = 142/414 (34%), Positives = 221/414 (53%), Gaps = 14/414 (3%)

Query: 1   MNQLKKDISLGAGIAQLSTTLMGTGLFMVPAIAAGIAGVFSLWAWLLLFVAICPIALTFA 60
           MN     I    G   ++TTL+GTG+F++P +    A   +L AW LL +AI P+AL F 
Sbjct: 1   MNSHSGTIGRWQGAGLMATTLLGTGVFILPQMTIDKAQAGALIAWSLLTLAIIPVALIFG 60

Query: 61  QLGKRYPNAGGTAYFVRQAFNPRLERAVAWLFLSVIPVGVPAAVTLAASFLQALLPAPLA 120
           +L   +P+A G AYFV +AF     R +  +FL V+P+G PAA+ +   F+ AL+P    
Sbjct: 61  RLASVFPHAAGPAYFVEKAFGRTAGRTIGLIFLLVVPMGAPAAILMTFQFVNALIPLDGW 120

Query: 121 NPLLTQTLTILLLVGVNLAGTKSSGRLQTLIALAIFSLVIAFWWRGEVTTQDLVMPALTQ 180
             +  + L I  L  +NL G + S +LQ  + L I ++V+  +  G  + Q   + +L  
Sbjct: 121 PKVGAEVLVIFGLFLLNLRGIQVSAKLQFGLTLCIVAIVVLLF--GASSVQPGHLTSLAS 178

Query: 181 EGWVSIGA---ALAVMFWCFVGIEAFAHMGEEFRNPQRDFPLAILIGSFVAGLTYWACSV 237
            G   I     A  + FW F+GIEA  H+ ++FR PQ+D   A+++G+ + G+ Y AC++
Sbjct: 179 YGTPEIPTIMIAAGIAFWSFLGIEAMTHLADDFRRPQQDMIPAMMMGTVLVGIIYVACTL 238

Query: 238 VVLKFSAFGTPQFDSGAIPWLSDQLFGTRWAIMISVIGFLACFASLNLYTQSLARMVWAQ 297
           ++L       P   S A+  + D L G   A +I V+G  +  A++N+Y  S AR++W+ 
Sbjct: 239 ILLL-----VPTDKSVAMIGVFDALLGGYGAQVIGVLGIASGLATVNVYAASAARLIWSF 293

Query: 298 AREYRPESAIARVSIRGVPAHATLLVGVVLFASCFIGHLTGLDLEFFLKLANGIFVLVYL 357
           + E       A  +  GVP  A   +  V+     + H TG +LE  +  +NG+FV++YL
Sbjct: 294 SNEGILPRCFAVKNRHGVPIRALAALLSVMACVIVLTHTTGQELEHLIAWSNGVFVVIYL 353

Query: 358 LAMLAAFKLLTGWSKHLAGLALVLCAGVFLCLGWSMLYALGVFVLLIRP---WQ 408
           +AMLAA KLL   +  L  L    C  + + LG SM Y L V +L + P   WQ
Sbjct: 354 MAMLAAAKLLPRSNLPLVVLGCGFCLALGIALGASMAYVL-VLILFVAPFLWWQ 406