Pairwise Alignments

Query, 204 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., Transmembrane amino acid efflux protein from Pseudomonas fluorescens FW300-N2E2

 Score = 76.6 bits (187), Expect = 3e-19
 Identities = 66/209 (31%), Positives = 98/209 (46%), Gaps = 18/209 (8%)

Query: 4   TVWLSLFTICI-LGAMSPGPSLAMVAKHSLAGGRKNGFAAAWAHAFGIGVYAFITLIGLA 62
           T  L LF + + L  + PGP++A V  H+LA G + G AAA   +F   +   +   G+ 
Sbjct: 4   TANLYLFVVAVVLLLIVPGPNMAFVTSHALAHGWRAGIAAALGISFSDVLMTMMVSAGIG 63

Query: 63  VVLHQSPVLFKTISYAGAAYLAYLGWNALRSKGGVAAKLESGESVSVWQSAREGLLISLL 122
            ++      F  +  AGA YL +L W ALR+    A +    +  S+W+    G L SLL
Sbjct: 64  ALVMSWAPAFDILRLAGAGYLLWLAWQALRTP--AATQDSQLQVASLWRIFCRGALNSLL 121

Query: 123 SPKIALFFIALFSQYVAVGSDLTSKAAIVITPLVVDGLWYSFITLILSSPRLLDKLRARA 182
           +PK  LFF+    Q+V V      KA  V   L+  G   + I L+  +   +   + RA
Sbjct: 122 NPKALLFFMVFLPQFVNV------KAGGVSVQLIFLGALLALIALVFHTLLGVCAAQLRA 175

Query: 183 VL----IDRLSGL-----VLIALAIRVLW 202
            L    I R  G      V+ ALA R+L+
Sbjct: 176 KLASGGISRRLGTYGFAGVMAALAARLLF 204