Pairwise Alignments

Query, 204 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., threonine efflux protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 57/228 (25%), Positives = 114/228 (50%), Gaps = 27/228 (11%)

Query: 1   MTLTVWLSLFTICILGAMSPGPSLAMVAKHSLAGGRKNGFAAAWAHAFGIGVYAFITLIG 60
           M L++  +L  I  +  +SPGP  A++ K + +  R    A A   +  I  +  ++L G
Sbjct: 1   MDLSLLFTLALIHCVALVSPGPDFAIMVKIATSQPRNTAIATAVGVSVAILAHTILSLTG 60

Query: 61  LAVVLHQSPVLFKTISYAGAAYLAYLGWNALRS------------KG------------- 95
           +++V+  S  L+  +   GA+YLA++G+ AL++            KG             
Sbjct: 61  VSLVIKSSHTLYLLVQLLGASYLAWMGFGALKATIAFFRKPKRLLKGEEAESSVATEAQA 120

Query: 96  --GVAAKLESGESVSVWQSAREGLLISLLSPKIALFFIALFSQYVAVGSDLTSKAAIVIT 153
             G  ++ ++ +S+S  Q    GL  +LL+PK  +FF+ LFS  +       +K A  + 
Sbjct: 121 NTGDNSQTKAEKSLSPRQGFMTGLYTNLLNPKALVFFLTLFSALITPSVTPATKVAAALV 180

Query: 154 PLVVDGLWYSFITLILSSPRLLDKLRARAVLIDRLSGLVLIALAIRVL 201
             V+  +W+ F+ L+LS  ++  K++    +ID + G++ +++A+ ++
Sbjct: 181 LFVLSLIWFGFLALMLSKAKVQQKMQRITPIIDAVIGVIFMSVALAIV 228