Pairwise Alignments

Query, 204 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., transporter, LysE family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 76.3 bits (186), Expect = 4e-19
 Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 8/197 (4%)

Query: 7   LSLFTICILGAMSPGPSLAMVAKHSLAGGRKNGFAAAWAHAFGIGVYAFITLIGLAVVLH 66
           LS+    +L  +SP     +V K+S    RK G   A     G+ V+   ++IG++ ++ 
Sbjct: 4   LSIVIFGLLIVVSPSADFVLVFKNSAMHSRKAGMLTAIGIGAGVCVHISYSIIGISQLIA 63

Query: 67  QSPVLFKTISYAGAAYLAYLGWNALRSKGGVAAKLESG----ESVSVWQSAREGLLISLL 122
            +  LF  + Y GAAYL Y+G   L S       L+ G    + V   +   +G L ++L
Sbjct: 64  NNAGLFSLVKYVGAAYLIYIGIAGLLS---AKLTLDYGTQLIKPVENRKYIMQGFLCNVL 120

Query: 123 SPKIALFFIALFSQYVAVGSD-LTSKAAIVITPLVVDGLWYSFITLILSSPRLLDKLRAR 181
           +PK  +FF+++FSQ ++  SD L    +  +   V+ G+W+  +  +++S +    L+  
Sbjct: 121 NPKTMIFFLSVFSQLISSHSDSLAFVISYGVYIAVLHGIWFCIVAYLVTSAKATRVLKRF 180

Query: 182 AVLIDRLSGLVLIALAI 198
              I++  G+ LI   +
Sbjct: 181 GHRINQACGVGLITFGV 197