Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (344), Expect = 8e-37
 Identities = 104/423 (24%), Positives = 193/423 (45%), Gaps = 23/423 (5%)

Query: 7   ISIIMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFFTVVQIG 66
           + I+  LI  S +FS SE ++ +  + RLR +A+ G + A+R + L  RP     ++ IG
Sbjct: 10  VIILFVLIIISAYFSGSETAMMSLNRYRLRHLANNGHKGAKRAIRLLERPDRLIGLILIG 69

Query: 67  LNAVAIMGGIVGESAFTPYIRALLEGLIPANLLSQASFVLSFMLVTSMFILIADLMPKRI 126
            N V I+   +               ++   L       ++  ++T + ++ A++ PK +
Sbjct: 70  NNLVNILASAIAT-------------ILGIRLFGDVGVAIATGVLTLVVLVFAEVTPKTV 116

Query: 127 AMAMPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSVPTERNDEITSDDIY--A 184
           A   PERIA      +   + LL P V   N + +   R L + + + D+  S +     
Sbjct: 117 AALHPERIAFPSSVLLKALLVLLSPLVKIVNFITSTFLRLLGIRSVKADDALSQEELRTV 176

Query: 185 VMDAGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIKQKISQHP 244
           V +AGA   ++ +  Q+M+ S+ +++ + V   M  R  L  +N++D    I +++ Q P
Sbjct: 177 VHEAGA---LIPQRHQEMLLSIMDLEKVTVEDIMIPRSDLYAINVNDDFSRINKQVIQSP 233

Query: 245 HNKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSLSEALEYF 304
           H + L+    +D   G+V  +  L      Q         V     IP+   L+  L  F
Sbjct: 234 HTRVLLYRDNIDDAVGFVHLRDALRLQSKQQFSKSSLLRAVKEIYFIPEGTPLNVQLANF 293

Query: 305 KINRVDFAVVMNEYALVVGVVTFNDLQSAVMG---TWVLAEGEEQIVARDGNSWLVDGVT 361
           + N+    +V++EY  + G+VT  D+   ++G   T ++    E I  +   S+L+D   
Sbjct: 294 QQNKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMITTPSEDINQQQDGSFLIDATI 353

Query: 362 PITDVMRSFAIEEFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDIDNYKVDQ 421
            I D+ +      FP     +T+ G ++  L +IP    S+  +GY  EVV++ +  V  
Sbjct: 354 NIRDLNKEMD-WHFP-IDGPKTLNGLILEYLEEIPEPNTSMRLSGYPLEVVEVADNMVKT 411

Query: 422 LLV 424
           + V
Sbjct: 412 VRV 414