Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  637 bits (1642), Expect = 0.0
 Identities = 327/436 (75%), Positives = 370/436 (84%), Gaps = 2/436 (0%)

Query: 1   MSFFENISIIMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFF 60
           MS  +N+ II+ LI  SCFFSMSEI+LAAARKIRLRQ+ADEGD RAERVL+LQA PG+FF
Sbjct: 1   MSLLDNMLIILLLIGTSCFFSMSEIALAAARKIRLRQLADEGDPRAERVLQLQAHPGSFF 60

Query: 61  TVVQIGLNAVAIMGGIVGESAFTPYIRALLEGLIPANLLSQASFVLSFMLVTSMFILIAD 120
           TVVQIGLNAVAIMGGIVGESAFTPYIRA LE  +    LSQ SFVLSF++VTS+FILIAD
Sbjct: 61  TVVQIGLNAVAIMGGIVGESAFTPYIRAGLESWVADPWLSQLSFVLSFIIVTSLFILIAD 120

Query: 121 LMPKRIAMAMPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSVPTERNDEITSD 180
           LMPKR AMAMPER+A  LVG M  CI LL P VW FNGLAN +FR L +PT RND++TSD
Sbjct: 121 LMPKRAAMAMPERVALVLVGPMTFCIRLLTPLVWVFNGLANAIFRLLQIPTARNDQVTSD 180

Query: 181 DIYAVMDAGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIKQKI 240
           DIYAVMDAGAEAGVLDK EQQM+E+VFEMQ++PVT+AMTARESLV+  L D EEVIK+KI
Sbjct: 181 DIYAVMDAGAEAGVLDKDEQQMIENVFEMQTVPVTAAMTARESLVYFLLQDDEEVIKRKI 240

Query: 241 SQHPHNKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSLSEA 300
           ++ PH KFLVCDGQLD IKG VD+K LLIRVINGQ + LK+S +V  C IIPD+LSLSE+
Sbjct: 241 AEDPHTKFLVCDGQLDTIKGVVDAKELLIRVINGQSITLKDSTLVHNCLIIPDSLSLSES 300

Query: 301 LEYFKINRVDFAVVMNEYALVVGVVTFNDLQSAVMGTWVLAEGEEQIVARDGNSWLVDGV 360
           +EYFK +R DFAVVMNEYALVVG+VT NDLQSAVMG W L E EEQI+ARD +SWLVDGV
Sbjct: 301 MEYFKNHRADFAVVMNEYALVVGIVTTNDLQSAVMGAWSLHESEEQIIARDKDSWLVDGV 360

Query: 361 TPITDVMRSFAIEEFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDIDNYKVD 420
           TPITDVMR+F IE FPQ QNYETIAGFMM+MLRKIP+RTD V + GYKFEVVDID YKVD
Sbjct: 361 TPITDVMRAFGIEAFPQSQNYETIAGFMMFMLRKIPKRTDFVNFGGYKFEVVDIDAYKVD 420

Query: 421 QLLVSRV--EPLEPIV 434
           QLLV+R+  E   P+V
Sbjct: 421 QLLVTRIPAEATPPLV 436