Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  628 bits (1620), Expect = 0.0
 Identities = 315/437 (72%), Positives = 371/437 (84%)

Query: 1   MSFFENISIIMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFF 60
           MS  +N+ II+ LI ASCFFSMSEI+LAA+RKIRLRQ+ADEGD RAE+VL LQ+ PG+FF
Sbjct: 1   MSLLDNVMIILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLHLQSYPGSFF 60

Query: 61  TVVQIGLNAVAIMGGIVGESAFTPYIRALLEGLIPANLLSQASFVLSFMLVTSMFILIAD 120
           TVVQIGLNAVAIMGGIVGESAF PY    L   +    LSQ SF++SF+LVTS FIL+AD
Sbjct: 61  TVVQIGLNAVAIMGGIVGESAFRPYFYQFLSSWLADPWLSQVSFLMSFLLVTSAFILVAD 120

Query: 121 LMPKRIAMAMPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSVPTERNDEITSD 180
           LMPKRIAMAMPE++A ++VG M +CI +L+P VWFFNG+A+ +F+ L +PT RNDEITSD
Sbjct: 121 LMPKRIAMAMPEQVALAVVGPMSVCIAVLRPLVWFFNGMASGIFKLLQIPTARNDEITSD 180

Query: 181 DIYAVMDAGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIKQKI 240
           DIYAVM+AGAEAGVLDKGEQQMME+VFEMQ++ VTSAMTARESLV+  L DSEE IK+KI
Sbjct: 181 DIYAVMNAGAEAGVLDKGEQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKI 240

Query: 241 SQHPHNKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSLSEA 300
           ++ PH KFLVCDGQLD +KG+VD+K LLIRVING+ + LK++++V    IIPDTLSLSEA
Sbjct: 241 AEDPHTKFLVCDGQLDMVKGFVDAKELLIRVINGENITLKDTSLVHTSLIIPDTLSLSEA 300

Query: 301 LEYFKINRVDFAVVMNEYALVVGVVTFNDLQSAVMGTWVLAEGEEQIVARDGNSWLVDGV 360
           +EYFK +R DFAVVMNEYALVVG+VT NDLQ AVMG W L E EEQI+ARD NSWLVDGV
Sbjct: 301 MEYFKNSRADFAVVMNEYALVVGIVTTNDLQRAVMGAWSLHESEEQIIARDSNSWLVDGV 360

Query: 361 TPITDVMRSFAIEEFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDIDNYKVD 420
           TPITDVMR+F IEEFP  QNYETIAGFMMYMLRKIP+RTD V Y GYKFEVVDID+YKVD
Sbjct: 361 TPITDVMRAFGIEEFPHSQNYETIAGFMMYMLRKIPKRTDFVNYGGYKFEVVDIDSYKVD 420

Query: 421 QLLVSRVEPLEPIVKEE 437
           QLLV+R++  E ++  +
Sbjct: 421 QLLVTRIDTNEKLMSPD 437