Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  254 bits (649), Expect = 4e-72
 Identities = 143/430 (33%), Positives = 244/430 (56%), Gaps = 8/430 (1%)

Query: 7   ISIIMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFFTVVQIG 66
           I I++ LI  +  F+MSEI++  ARK RL  +A  G   A+  L+L   P  F + VQIG
Sbjct: 3   IFILIGLIVLNGLFAMSEIAIVTARKSRLTALAHAGSSTAKAALKLAEDPTQFLSTVQIG 62

Query: 67  LNAVAIMGGIVGESAFTPYIRALLE--GLIPANLLSQASFVLSFMLVTSMFILIADLMPK 124
           + ++ I+ GI GES     +   L+  GL P ++ +  S VL  ++VT + I+I +L+PK
Sbjct: 63  ITSIGILNGIFGESILAEPLSLWLQTFGLSP-DVTNIFSTVLVVIIVTYVSIVIGELVPK 121

Query: 125 RIAMAMPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSVPTERNDEITSDDIYA 184
           RI     E IA  +   M+      KPFVW  +G  + L R +      +D +T +DI A
Sbjct: 122 RIGQVSAESIACIMAKPMVFLAIATKPFVWMLSGSTHALMRLMGFSHRLDDNVTQEDIQA 181

Query: 185 VMDAGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIKQKISQHP 244
           ++  G+ AGV++  E  M+++VF +    ++S M  R  +VFL+L+   +   + + Q P
Sbjct: 182 MLQEGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSP 241

Query: 245 HNKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSLSEALEYF 304
           H++F VC   +D + G + +K LL   I G+ + L +  +V  C  +P++LS  E LE+F
Sbjct: 242 HSRFPVCRNNVDDMVGIISAKQLLSESIAGERLELVD--LVKNCNFVPNSLSGMELLEHF 299

Query: 305 KINRVDFAVVMNEYALVVGVVTFNDLQSAVMGTWVLAE-GEEQIVARDGNSWLVDGVTPI 363
           +        V++EY  + G+VT  D+  A+ G +   +  ++ ++ R+  S L+DG+ PI
Sbjct: 300 RTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEFFQEDVNDQMVIKREDGSLLLDGLIPI 359

Query: 364 TDVMRSFAIEEFPQQQN--YETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDIDNYKVDQ 421
            D+  +  I++ P +++  Y+T+ GF+MY L KIP+ TD V  AG++ E++D+D  +VD+
Sbjct: 360 FDLKDALGIKQLPNEEDGRYQTLNGFLMYELGKIPQTTDIVEVAGWRLEIMDMDGKRVDK 419

Query: 422 LLVSRVEPLE 431
           +L  ++   E
Sbjct: 420 VLAQKLPDAE 429