Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., hemolysin protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (319), Expect = 7e-34
 Identities = 103/413 (24%), Positives = 191/413 (46%), Gaps = 29/413 (7%)

Query: 10  IMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFFTVVQIGLNA 69
           ++ LI  S +FS SE ++    + RLR +A  G + A R L+L  RP     ++ IG N 
Sbjct: 13  LLVLILFSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIGNNL 72

Query: 70  VAIMGGIVGESAFTPYIRALLEGLIPANLLSQASFVLSFMLVTSMFILIADLMPKRIAMA 129
           V I+              A +  +I   L       ++  ++T + ++  ++ PK IA  
Sbjct: 73  VNILA-------------ASIATIIGMRLWGDLGVAIASGVLTLVVLVFGEVTPKTIAAL 119

Query: 130 MPERIATSLVGGMLICITLLKPFVWF---FNGLANLLFRALSVPT-ERNDEITSDDIYAV 185
            PERIA        + I L K F +     N +   + R + + +   +D ++ +++  V
Sbjct: 120 NPERIA---FPSSYLLIALSKIFAYVVTSVNFITTGILRLVGIKSISSSDALSKEELRTV 176

Query: 186 M-DAGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIKQKISQHP 244
           + +AGA   ++ +  Q+M+ S+ +++ + V   M  R  +  +N++D  + I +++ Q P
Sbjct: 177 VHEAGA---LIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSP 233

Query: 245 HNKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSLSEALEYF 304
           H + LV    +D   G++  +  L      Q         V     IP+   L+  L  F
Sbjct: 234 HTRVLVYRDTIDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANF 293

Query: 305 KINRVDFAVVMNEYALVVGVVTFNDLQSAVMG---TWVLAEGEEQIVARDGNSWLVDGVT 361
           + N+    +V++EY  + G+VT  D+   ++G   T +LA   E I  +   S+LV+   
Sbjct: 294 QHNKERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDINVQQDGSYLVNASI 353

Query: 362 PITDVMRSFAIEEFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDI 414
            I D+ +     +FP     +T+ G ++  L  IP    S+  AGY  EV+++
Sbjct: 354 TIRDLNKEMK-WDFP-TDGPKTLNGLILEYLEDIPSENTSLRLAGYPLEVIEV 404