Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., putative hemolysin (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  102 bits (255), Expect = 2e-26
 Identities = 90/433 (20%), Positives = 191/433 (44%), Gaps = 35/433 (8%)

Query: 10  IMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGN-FFTVVQIGLN 68
           ++  +A S FFS  EI+  +  K+R       G     R+L +  +  N F + + +G N
Sbjct: 7   LLITMAFSAFFSGMEIAFVSVDKLRFEMERKGGI--TSRILSIFFKNSNEFISTMLVGNN 64

Query: 69  AVAIMGGIVGESAFTPYIRALLEGLIPANLLSQASFVLSFMLVTSMFILIA-DLMPKRIA 127
              ++ GI+           LL G I  + L     VL+  +++++ IL+  + +PK + 
Sbjct: 65  IALVIYGILMAQIIGDN---LLAGFIDNHFL----MVLAQTVISTLIILVTGEFLPKTLF 117

Query: 128 MAMPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSVPTERNDEITSDDIYAVMD 187
              P  +       + IC  +L P     +GL+ L  R   +   ++    SD  +  +D
Sbjct: 118 KINPNLVLNVAAIPLFICYVILYPVSKLSSGLSCLFLRIFGMKVNKD---ASDKAFGKVD 174

Query: 188 A----------GAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIK 237
                       A    LD  E ++ ++  +  +I +   +  R  +V ++L+ S + +K
Sbjct: 175 LDYFVQSSIDNAANEEELDT-EVKIFQNALDFSNIKIRDCIVPRTEVVAVDLTTSLDELK 233

Query: 238 QKISQHPHNKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSL 297
            +  +   +K +V DG +D + G++ S  +  R       N+K+       PI+P+T+S 
Sbjct: 234 SRFIESGISKIIVYDGNIDNVVGFIHSSEMF-RDPKDWRDNVKD------VPIVPETMSA 286

Query: 298 SEALEYFKINRVDFAVVMNEYALVVGVVTFNDLQSAVMGTWVLAEGEEQIVAR--DGNSW 355
            + ++ F + +   AVV++E+    G+V+  DL   + G           + +  D + +
Sbjct: 287 HKLMKLFMLQKRTIAVVVDEFGGTSGIVSLEDLVEEIFGDIEDEHDNTSYICKKIDEDEY 346

Query: 356 LVDGVTPITDVMRSFAIEEFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDID 415
           ++     I  V   F + + P+  +Y T+ G ++   +  P+  + V    Y+F+++ + 
Sbjct: 347 VLSARLEIEKVNEMFGL-DLPESDDYLTVGGLILNQYQSFPKLHELVRVGRYQFKIIKVT 405

Query: 416 NYKVDQLLVSRVE 428
             K++ + +  +E
Sbjct: 406 ATKIELVRLKVME 418