Pairwise Alignments

Query, 437 a.a., HlyC/CorC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  135 bits (341), Expect = 2e-36
 Identities = 104/410 (25%), Positives = 190/410 (46%), Gaps = 23/410 (5%)

Query: 10  IMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFFTVVQIGLNA 69
           ++ LI  S +FS SE ++    + RLR +A  G + A R L+L  RP     ++ IG N 
Sbjct: 13  LLVLILCSAYFSGSETAMMTLNRYRLRHLASNGHKGAIRALKLLERPDRLIGLILIGNNL 72

Query: 70  VAIMGGIVGESAFTPYIRALLEGLIPANLLSQASFVLSFMLVTSMFILIADLMPKRIAMA 129
           V I+   +               +I   L       ++  ++T + ++ A++ PK IA  
Sbjct: 73  VNILASAIAT-------------IIGMRLWGDLGVAVATGVLTLVVLVFAEVTPKTIAAL 119

Query: 130 MPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSVPT-ERNDEITSDDIYAVM-D 187
            PERIA      ++   T+    V   N +   + R   + T   +D ++ +++  V+ +
Sbjct: 120 NPERIAFPSSILLIGLSTIFAYVVTSVNWITTGILRLFGIKTISSSDALSQEELRTVVHE 179

Query: 188 AGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEEVIKQKISQHPHNK 247
           AGA   ++ +  Q+M+ S+ +++ + V   M  R  +  +N++D  + I +++ Q PH +
Sbjct: 180 AGA---LIPQRHQEMLLSILDLEKVTVEDIMVPRSDIYAINVNDDFKFINRQVIQSPHTR 236

Query: 248 FLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSLSEALEYFKIN 307
            LV    +D   G++  +  L      Q         V     IP+   L+  L  F+ N
Sbjct: 237 VLVYRDTIDDAVGFIHLRDALRLQSKEQFSKSSLLRAVKELYFIPEGTPLNVQLANFQHN 296

Query: 308 RVDFAVVMNEYALVVGVVTFNDLQSAVMG---TWVLAEGEEQIVARDGNSWLVDGVTPIT 364
           +    +V++EY  + G+VT  D+   ++G   T +LA   E I A+   S+LVD    I 
Sbjct: 297 KERIGLVVDEYGDIQGLVTLEDILEEIVGDFTTSMLATPSEDITAQQDGSYLVDASITIR 356

Query: 365 DVMRSFAIEEFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVVDI 414
           D+ +     +FP     +T+ G ++  L  IP    S+  AGY  EV+++
Sbjct: 357 DLNKEMK-WDFP-TDGPKTLNGLILEYLEDIPAENTSLRLAGYPLEVIEV 404