Pairwise Alignments

Query, 328 a.a., drug/metabolite DMT transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., integral membrane domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 24/305 (7%)

Query: 25  LYGVAAILLWGSLMALTRRVAEEFSPIGGAALIYTVSTLFLLFAMGMPRLKAGSSR---- 80
           LYG+AA+LLW ++    +    E+SP+    +    S L L   +G        +R    
Sbjct: 9   LYGMAAVLLWSTVATAFKLALAEYSPLQLLFIAVITSILALSVILGFQGKLRQVARQWQE 68

Query: 81  ---YILIGGAL--FVSYEICLALALGMASDRLQAIEMSVINYLWPALTVLIAVLLSQRAV 135
              + L  G L  F+ Y     L L  A D L A +   +NY W  L  L+AV L  + +
Sbjct: 69  RPLFYLQTGLLNPFLYY-----LVLFKAYDLLPAQQALSLNYTWAILLPLLAVPLLGQQL 123

Query: 136 SFWVYPSVGLAFAGVAWTIVAEQGISLADFSARIATNPAVYAMALTGAFIWAIYCNVTQR 195
                 +  +A+ GV    V   G SLA FS    + P    MALT   +W +Y  V  +
Sbjct: 124 RKTDLLAALIAYGGV---FVIATGGSLAGFS---LSEPTGIVMALTSTLLWCLYWIVNTK 177

Query: 196 LARGQNAIVLFFAATAATLWLQYALSNEPAL-SFTGSSMGTLLLTGIV-MGSGYALWNVA 253
             +G   + L  +      ++  A+     L +F+G  +   +  G+  MG  + LW +A
Sbjct: 178 -DKGDPVVSLMLSFLVGLPFVTVAMLVTQGLPTFSGQGLAAAVYVGLFEMGVTFVLWLMA 236

Query: 254 ILRGNMLL-LATLSYFTPVISTLFSSLILGVVLGLSFWQGVIMVTFGSLICWWVTRESSS 312
           +        ++TL + +PV+S  F +L+LG  + LS + G+ ++     +  W+ R   +
Sbjct: 237 LKSSERTANISTLVFLSPVLSIGFIALVLGEDIRLSTFIGLGLILSALALQQWLPRWFGN 296

Query: 313 STGEV 317
            T  V
Sbjct: 297 QTETV 301