Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., HTH-type transcriptional activator CmpR from Synechocystis sp000284455 PCC 6803

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 3   LSQIEAFCTIANTGSVSEAARQLDCNRTKLSMAIKALEKELNVALFVRAGNYLTLSEAGK 62
           L Q E F  IA TGS ++AA +L   +  +S  +K L K + V L+ + G  + L+EAG+
Sbjct: 6   LHQFEVFAAIARTGSFTKAAEELFLTQPTVSQQMKQLTKAIGVPLYEQIGRKIYLTEAGQ 65

Query: 63  AVYKDCESLLITASRIRQTCAQACSEFAAEMWIARDDSL-------PDHFWQDIASQLHK 115
           AV        + AS+   +C     E  A++   +  +L         +F   +  +  +
Sbjct: 66  AV--------LDASKNITSCLDQLQEVIADLQGLKKGNLRLATITTGKYFVPRLLGEFRQ 117

Query: 116 LFPNTSFNMVLASSGDLANLVATQQVNCAF-GVDYERLDDPRITYQPLGKIRLMSVCNSQ 174
            +P  S ++ + +   +   +A    +  F G     LD   I  +   +  L+ + + Q
Sbjct: 118 QYPGISISLQIGNRQQILERLANNLDDLYFLGKPPSNLD---INIRHFLENPLVVIASRQ 174

Query: 175 HPLVKQKRVSDEEL 188
           HPLVK+K++S E L
Sbjct: 175 HPLVKEKKISLERL 188