Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 66.6 bits (161), Expect = 6e-16
 Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 17/266 (6%)

Query: 1   MNLSQIEAFCTIANTGSVSEAARQLDCNRTKLSMAIKALEKELNVALFVRAGNYLTLSEA 60
           M L Q+E F  IA +G VS+AA+ L       SMA+  LEK+L+V LF R GN L L+  
Sbjct: 3   MTLRQLEVFEAIARSGQVSKAAQWLGMTGPAASMALAELEKQLSVRLFERVGNRLRLNAQ 62

Query: 61  GKAVYKDCESLLITASRIRQTCAQACSEFAAEMWIARDDSLPDHFWQDIASQLHKLFPNT 120
           G  +      LL  AS++      + +  A E+ +    ++ +      A    +   + 
Sbjct: 63  GAQLLPLATELLAQASKVEALFNASGAVLAGELKVGASTTIGNFLLAKAAVAFGQQHLDA 122

Query: 121 SFNMVLASSGDLANLVATQQVNCAF--GVDYERLDDPRITYQPLGKIRLMSVCNSQHPLV 178
             ++ + ++  +   VA  +V   F  G   +R  D R  +Q      L   C+  HPL 
Sbjct: 123 LVDVSIHNTSAVIEQVANFEVELGFIEGHCVDRRLDVRAWHQD----HLCVFCHPAHPLA 178

Query: 179 KQKRVSDEELRKFMQAVMV--------YLNEKDNPNLQPFSRRYIGFSSFEYMLNTILSE 230
            +K VS +E+R+    +          ++N      L P +R    FS+ + +   +   
Sbjct: 179 GRK-VSVDEVRQQYWVLREEGSGTREHFVNAAHALGLHPEAR--FCFSTADAIKLAVKQG 235

Query: 231 NAWGVLPEPLIRHYLREQQLTVIKHT 256
              GVL E  +   L  ++L +I+ T
Sbjct: 236 AGLGVLSELALERELARRELALIEVT 261