Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.9 bits (154), Expect = 4e-15
 Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 12/257 (4%)

Query: 9   FCTIANTGSVSEAARQLDCNRTKLSMAIKALEKELNVALFVRAGNYLTLSEAGKAVYKDC 68
           F TIA  GS+S AA+QL+ + + +S  +  LE ++ ++LF R   +LTL+EAG   Y++C
Sbjct: 12  FATIAEKGSMSAAAQQLNLSSSAVSQQVAKLEMDMGISLFHRNTRHLTLTEAGHLFYENC 71

Query: 69  ESLLITASRIRQTCAQACSEFAAEMWIARDDSLPDHFWQDIASQLHKLFPNTSFNMVLAS 128
             ++                 + E+ IA              + L    P  S N+ L  
Sbjct: 72  IKIIKIVESGEHKLNALKGTPSGELKIAAPVGFGSGLLSQPLANLLAAHPQISLNLQLQD 131

Query: 129 SG-DLANLVATQQVNCAFGVDYERLDDPRITYQPLGKIRLMSVCNSQHPLVKQKRVSDEE 187
              D+ N    + ++ A  +    L D  +  +PL   R++      +    Q      E
Sbjct: 132 GPIDIVN----EGIDLAICIG--PLSDSNLIARPLADWRMLLCAAPSYIPQHQILQHPGE 185

Query: 188 LRKFMQ-----AVMVYLNEKDNPNLQPFSRRYIGFSSFEYMLNTILSENAWGVLPEPLIR 242
           L+ F +     A   +L           S + I  ++ + ++   L    + VLPEP + 
Sbjct: 186 LQAFNRISHSYAKPEFLTHSQTQERVELSAQRISVNNMQTLIQLTLDGLGFAVLPEPEVH 245

Query: 243 HYLREQQLTVIKHTYGL 259
            YL   QL  +   + L
Sbjct: 246 QYLASGQLVTLLPEWSL 262