Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.9 bits (154), Expect = 4e-15
 Identities = 58/254 (22%), Positives = 104/254 (40%)

Query: 1   MNLSQIEAFCTIANTGSVSEAARQLDCNRTKLSMAIKALEKELNVALFVRAGNYLTLSEA 60
           MN+ +++AF   A  GSVS AARQL   + ++S  I  LE +L V LF R  N + LS A
Sbjct: 2   MNIQRVKAFVIAAQLGSVSAAARQLGKRQPQVSQWIAELEVDLGVQLFQRGANQVELSLA 61

Query: 61  GKAVYKDCESLLITASRIRQTCAQACSEFAAEMWIARDDSLPDHFWQDIASQLHKLFPNT 120
           G+ +       L    +   + A   +     + +  +  +P +    + +   + FP  
Sbjct: 62  GQHLLPRAILALSQWEQFSSSAAHFATYQKGIICLGVESHIPLNGLITVVNTFFEQFPAV 121

Query: 121 SFNMVLASSGDLANLVATQQVNCAFGVDYERLDDPRITYQPLGKIRLMSVCNSQHPLVKQ 180
           +F + +     L        ++       + L    + Y  +GK + + + + Q PL KQ
Sbjct: 122 NFVLQVDKLTVLNEAFNAGNIDLLLRHQSDELHLTEVGYCRIGKYKEVLLVSRQSPLSKQ 181

Query: 181 KRVSDEELRKFMQAVMVYLNEKDNPNLQPFSRRYIGFSSFEYMLNTILSENAWGVLPEPL 240
             V+  EL  + + V              FS  Y        +   ++  + +  LP  L
Sbjct: 182 AIVAPSELAIYREYVWAGGQACCEDLEVGFSGHYCVIPDLGLLKKLLIDGSGYAFLPLSL 241

Query: 241 IRHYLREQQLTVIK 254
            +  + +  LTV+K
Sbjct: 242 AQTEINQGLLTVVK 255