Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 63.9 bits (154), Expect = 4e-15
 Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 12/257 (4%)

Query: 9   FCTIANTGSVSEAARQLDCNRTKLSMAIKALEKELNVALFVRAGNYLTLSEAGKAVYKDC 68
           F  IA  GS+S AA QL+ + + +S  +  LE ++ ++LF R   +LTL+EAG   Y++C
Sbjct: 12  FAAIAEKGSMSAAATQLNLSSSAVSQQVAKLEMDMGISLFHRNTRHLTLTEAGALFYENC 71

Query: 69  ESLLITASRIRQTCAQACSEFAAEMWIARDDSLPDHFWQDIASQLHKLFPNTSFNMVLAS 128
             ++       Q         + ++ IA              + L    P  S N+ L  
Sbjct: 72  IKIIKIVESAEQQLHALKGTPSGKLKIAAPVGFGGGLLSQPLAHLLAAHPQISLNLQLQD 131

Query: 129 SG-DLANLVATQQVNCAFGVDYERLDDPRITYQPLGKIRLMSVCNSQHPLVKQKRVSDEE 187
              D+ N    + ++ A  +    L D  +  +PL   R++      +  + Q      +
Sbjct: 132 GPIDIVN----EGIDLAICIG--PLSDSNLIARPLADWRMLLCAAPSYIPLHQSLQHPAD 185

Query: 188 LRKFMQAVMVYLNEKDNPNLQPFSR-----RYIGFSSFEYMLNTILSENAWGVLPEPLIR 242
           L+ F +    Y   +   +LQ   R     + I  ++ + ++   L    + VLPEP + 
Sbjct: 186 LQGFNRISHSYAKPEFLTHLQTQERIELPAQRINVNNMQTLIQLTLDGLGFAVLPEPEVH 245

Query: 243 HYLREQQLTVIKHTYGL 259
            YL   QL  +   + L
Sbjct: 246 QYLASGQLVTLLPEWSL 262