Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 77.0 bits (188), Expect = 5e-19
 Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 5/254 (1%)

Query: 3   LSQIEAFCTIANTGSVSEAARQLDCNRTKLSMAIKALEKELNVALFVRAGNYLTLSEAGK 62
           L  ++     A TGS S AAR+L   ++ +S  I  LE +L++ LF R G Y  L++AG 
Sbjct: 5   LGSLKILIAAAETGSFSAAARKLGKAQSVVSTTISNLEIDLDLTLFERTGRYPQLTQAGV 64

Query: 63  AVYKDCESLLITASRIRQTCAQACSEFAAEMWIARDDSLPDHFWQDIASQLHKLFPNTSF 122
            + ++ E LL  + R++    +  S     + +A DD     +   +       FP    
Sbjct: 65  RIVQEAEVLLAQSQRLQAIAGELASGVETRLTLAIDDDSHLPWLGSLLEHFATRFPMVEL 124

Query: 123 NMVLASSGDLANLVATQQVNCAFGVDYERLDDPR--ITYQPLGKIRLMSVCNSQHPLVKQ 180
            ++     D+ +L+ T +     G+ Y+  +  R  +TY  LG++ +  V +++HPL ++
Sbjct: 125 ELLFPLMEDVTDLLLTGRAQ--LGICYKNENPHREIVTY-TLGEVAMPIVVSTEHPLARK 181

Query: 181 KRVSDEELRKFMQAVMVYLNEKDNPNLQPFSRRYIGFSSFEYMLNTILSENAWGVLPEPL 240
           + +++ +L+   Q ++    E         S +         ++  +     W  +P  L
Sbjct: 182 QPLNEIDLQGSRQLLVTGRREGSERQRFRLSAQVWWVEGDLGVMEFVKRGLGWAAIPAFL 241

Query: 241 IRHYLREQQLTVIK 254
           I+  L  Q++ V++
Sbjct: 242 IQEALARQEVVVLE 255