Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  106 bits (265), Expect = 6e-28
 Identities = 83/292 (28%), Positives = 130/292 (44%), Gaps = 7/292 (2%)

Query: 25  LSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLIP 84
           +S   L  L  L V+L+  SV + A RL +SPS++S+ LA+LRE   D L  R G  L+P
Sbjct: 1   MSSPDLNLLVTLDVLLSEGSVARAARRLQLSPSAMSRALARLRETTGDPLLVRAGRGLVP 60

Query: 85  TPYVQQMGPTVHHVLSSMNGLLH-CTEFDPQAYQGHYRLAMRESTFELFAPKVTAILAAC 143
           TP   ++   V H++     +L   T  D       + L  RE   E FA  +   +   
Sbjct: 61  TPRALELREQVSHLVQQAQAVLRPVTTPDLGRLSRTFTLRTREGFVENFAIDLITRIHEQ 120

Query: 144 SSELSMTIHSKEHYGFEALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELVCLMSAD 203
           +  + +    K       L+ G +D      D    P    +L  Q + SD L+ ++ A 
Sbjct: 121 APGVRLRFVEKTDRDSTTLREGTVDLETAVVDKDTSP----ELRTQALFSDRLIGVVRAG 176

Query: 204 HPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAAAILCRQ 263
           HPL+ A +S   Y A  H+G+    L+    ++ L   + +R I    P F +A  L R 
Sbjct: 177 HPLSQATVSAAGYAAGGHVGVSMRGLDHGLIDQALAALNLSREIVTTVPGFSSALGLARS 236

Query: 264 THLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWL 315
           + L+ +  +R+   A    GL   TLPF       +++W+     D   RWL
Sbjct: 237 SDLIASVPERYT--ASLRVGLHSFTLPFSVPGFTIAMLWHPRMDADPVHRWL 286