Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score = 96.7 bits (239), Expect = 6e-25
 Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 17/302 (5%)

Query: 24  HLSRFSLKHLTALHVMLNTRSVTQTAARLCVSPSSISKILAQLRELLNDDLFYRDGNQLI 83
           +L +  L  L     ++  +++++ A RL +S S++S  LA+LR+ L + LF R    ++
Sbjct: 4   NLRQLDLNLLLVFDALMQEQNLSRAAVRLHLSQSTVSNALARLRKQLGEPLFQRTARGML 63

Query: 84  PTPYVQQMGPTVHHVLSSMNGLLHCTEFDPQA-----YQGHYRLAMRESTFELFAPKVTA 138
           PTP  Q +   V   L  +      T   PQA      +  +R++M +    +F P   +
Sbjct: 64  PTPQAQALYGPVREALHLLR-----TGLAPQAGIDTGSELTFRVSMNDYAQAVFLPVALS 118

Query: 139 ILAACSSELSMTIHSKEHYGF-EALQSGLIDCILLPHDISQPPTFAQDLVWQVIESDELV 197
            L A +  L +++ S +     + L++G +D  +          F  +L ++ +  +EL 
Sbjct: 119 RLQALAPRLVLSVQSDDADTLVKRLRTGELDLAI------DYLHFDDELRYEPLREEELA 172

Query: 198 CLMSADHPLAHAELSVDAYLAYKHIGILDNELNEPYFEKYLTQQHETRRIAVATPDFGAA 257
            + SADHP    +L++  Y    H+ +          E  L      R++ +  P + A 
Sbjct: 173 VIASADHPAIQQQLTLAQYQNASHVSVHPRAGRGSPLEIVLGSSKVQRKVQLLVPHYLAI 232

Query: 258 AILCRQTHLLLTCSKRWADHAMQAQGLVQKTLPFEYGKVAYSLVWNKPSMNDRAIRWLCQ 317
             +  QT LL T  K  A+H  +   L    LP     V  SL+W++       +RWL +
Sbjct: 233 PSVVSQTRLLGTVPKALAEHFAEQYALQVFPLPMAMAPVQVSLIWHRQQDASVGLRWLRR 292

Query: 318 QL 319
           QL
Sbjct: 293 QL 294